RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 GK3PQ14409 553 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 ZYXQ15942 572 aaKnown RBP16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 CALCRLQ16602 461 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 RGS9BPQ6ZS82 235 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 C3orf62Q6ZUJ4 267 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 SIAH1Q8IUQ4 282 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 RFFLQ8WZ73 363 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 MRRFQ96E11 262 aaKnown RBP16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 HEPHQ9BQS7 1158 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 ALG13Q9NP73 1137 aaKnown RBP16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 NDUFA13Q9P0J0 144 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 DNAJC6O75061 913 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 GCAP28676 217 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 ACTR3P61158 418 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 AMPD3Q01432 767 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 ASPHQ12797 758 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 GRB10Q13322 594 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 TGFBIQ15582 683 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 STYK1Q6J9G0 422 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 SV2BQ7L1I2 683 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 KCNK18Q7Z418 384 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 TRABD2AQ86V40 505 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 ARHGAP24Q8N264 748 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 SYT2Q8N9I0 419 aaPredicted RBP16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 RBM15BQ8NDT2 890 aaKnown RBP16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 PPP4R1Q8TF05 950 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 MTMR9Q96QG7 549 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 THAP2Q9H0W7 228 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 TAOK3Q9H2K8 898 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 ZDHHC7Q9NXF8 308 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 FAF1Q9UNN5 650 aaPredicted RBP16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 B2RBV5 119 aa16.52■□□□□ 0.24
CTDSP1-201ENST00000273062 USP17L15C9J2P7 530 aa16.52■□□□□ 0.24
CTDSP1-201ENST00000273062 USP17L13C9JLJ4 530 aa16.52■□□□□ 0.24
CTDSP1-201ENST00000273062 USP17L11C9JVI0 530 aa16.52■□□□□ 0.24
CTDSP1-201ENST00000273062 USP17L18D6R9N7 530 aa16.52■□□□□ 0.24
CTDSP1-201ENST00000273062 USP17L22D6RA61 530 aa16.52■□□□□ 0.24
CTDSP1-201ENST00000273062 USP17L17D6RBQ6 530 aa16.52■□□□□ 0.24
CTDSP1-201ENST00000273062 USP17L19D6RCP7 530 aa16.52■□□□□ 0.24
CTDSP1-201ENST00000273062 USP17L20D6RJB6 530 aa16.52■□□□□ 0.24
CTDSP1-201ENST00000273062 ENTPD1P49961 510 aa16.52■□□□□ 0.24
CTDSP1-201ENST00000273062 USP17L24Q0WX57 530 aa16.52■□□□□ 0.24
CTDSP1-201ENST00000273062 PKN2Q16513 984 aaKnown RBP16.52■□□□□ 0.24
CTDSP1-201ENST00000273062 USP17L6PQ6QN14 398 aa16.52■□□□□ 0.24
CTDSP1-201ENST00000273062 UTP6Q9NYH9 597 aaKnown RBP16.52■□□□□ 0.24
CTDSP1-201ENST00000273062 TIMM22Q9Y584 194 aa16.52■□□□□ 0.24
CTDSP1-201ENST00000273062 GREB1LQ9C091 1923 aaPredicted RBP16.52■□□□□ 0.24
CTDSP1-201ENST00000273062 SH3PXD2BA1X283 911 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 F8W8V4 182 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 WDR46O15213 610 aaKnown RBP16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 CA4P22748 312 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 NR1H3Q13133 447 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 PDCD4Q53EL6 469 aaKnown RBP16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 C1orf146Q5VVC0 180 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 CYFIP1Q7L576 1253 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 ULK2Q8IYT8 1036 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 DDX12PQ92771 950 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 SKA1Q96BD8 255 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 MAML3Q96JK9 1138 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 THTPAQ9BU02 230 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 TRAIPQ9BWF2 469 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 LRRC27Q9C0I9 530 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 PSTPIP2Q9H939 334 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 TRPV5Q9NQA5 729 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 LZTS1Q9Y250 596 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 TRIM17Q9Y577 477 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 ALG6Q9Y672 507 aa16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 ZNF646O15015 1829 aaPredicted RBP16.52■□□□□ 0.23
CTDSP1-201ENST00000273062 ZBTB5O15062 677 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 KRT38O76015 456 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 PON1P27169 355 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 ITGA8P53708 1063 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 ZBTB16Q05516 673 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 TLR1Q15399 786 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 SIX1Q15475 284 aaPredicted RBP16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 CYP4F22Q6NT55 531 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 DHDDSQ86SQ9 333 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 MYOCDQ8IZQ8 938 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 GSTCDQ8NEC7 633 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 C1orf54Q8WWF1 131 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 PRMT6Q96LA8 375 aaPredicted RBP16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 TRABDQ9H4I3 376 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 RIC8AQ9NPQ8 531 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 ASIC3Q9UHC3 531 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 CLEC11AQ9Y240 323 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 HBS1LQ9Y450 684 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 MYO3BQ8WXR4 1341 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 TNS1Q9HBL0 1735 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 A0A1B0GTW7 788 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 KRT17Q04695 432 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 C16orf72Q14CZ0 275 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 SLC15A2Q16348 729 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 QRICH1Q2TAL8 776 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 ANKRD20A4Q4UJ75 823 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 ELMSAN1Q6PJG2 1045 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 LVRNQ6Q4G3 990 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 ALYREFQ86V81 257 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 FAM172AQ8WUF8 416 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 JDP2Q8WYK2 163 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 AK8Q96MA6 479 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms