RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 MCL1Q07820 350 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 NFX1Q12986 1120 aaKnown RBP13.64□□□□□ -0.23
CPSF6-201ENST00000266679 KYNUQ16719 465 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 DCUN1D2Q6PH85 259 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 C6orf89Q6UWU4 347 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 CEP120Q8N960 986 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 KAT2BQ92831 832 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 COPS5Q92905 334 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 SLITRK1Q96PX8 696 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 ROPN1BQ9BZX4 212 aaPredicted RBP13.64□□□□□ -0.23
CPSF6-201ENST00000266679 ROPN1Q9HAT0 212 aaPredicted RBP13.64□□□□□ -0.23
CPSF6-201ENST00000266679 TMEM51Q9NW97 253 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 NINJ2Q9NZG7 142 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 CTNNAL1Q9UBT7 734 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 GGA2Q9UJY4 613 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 POLIQ9UNA4 740 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 CCL15-CCL14A0A0B4J2E2 113 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 A0A0G2JLL6 359 aaPredicted RBP13.64□□□□□ -0.23
CPSF6-201ENST00000266679 HOXC6P09630 235 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 RAP1GAPP47736 663 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 IFNAR2P48551 515 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 SF3A3Q12874 501 aaKnown RBP eCLIP13.64□□□□□ -0.236e-6■■■□□ 15.2
CPSF6-201ENST00000266679 MXD4Q14582 209 aaPredicted RBP13.64□□□□□ -0.23
CPSF6-201ENST00000266679 CCL15Q16663 113 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 SGSM1Q2NKQ1 1148 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 CELF3Q5SZQ8 465 aaKnown RBP13.64□□□□□ -0.23
CPSF6-201ENST00000266679 MFSD5Q6N075 450 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 MPZL3Q6UWV2 235 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 MFSD7Q6UXD7 560 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 PRRT2Q7Z6L0 340 aaPredicted RBP13.64□□□□□ -0.23
CPSF6-201ENST00000266679 YTHDF3Q7Z739 585 aaKnown RBP13.64□□□□□ -0.23
CPSF6-201ENST00000266679 TMEM130Q8N3G9 435 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 TMEM35BQ8NCS4 154 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 TFAP2BQ92481 460 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 EVPLQ92817 2033 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 RBM41Q96IZ5 413 aaKnown RBP13.64□□□□□ -0.23
CPSF6-201ENST00000266679 PRMT1Q99873 361 aaKnown RBP13.64□□□□□ -0.23
CPSF6-201ENST00000266679 C2orf40Q9H1Z8 148 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 F8VP50 259 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 INO80B-WBP1J3KQ70 363 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 FKTNO75072 461 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 LGR5O75473 907 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 LSM8O95777 96 aaKnown RBP13.63□□□□□ -0.23
CPSF6-201ENST00000266679 TTC4O95801 387 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 TNNC2P02585 160 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 CETN2P41208 172 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 CLCN3P51790 818 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 SURF1Q15526 300 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 TNFAIP8L3Q5GJ75 292 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 TMEM63BQ5T3F8 832 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 ATF7IP2Q5U623 682 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 GKAP1Q5VSY0 366 aaPredicted RBP13.63□□□□□ -0.23
CPSF6-201ENST00000266679 WDR78Q5VTH9 848 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 EEF1DP3Q658K8 133 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 DENND1BQ6P3S1 775 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 CCDC121Q6ZUS5 278 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 TAOK1Q7L7X3 1001 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 EXOC3L1Q86VI1 746 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 MGARPQ8TDB4 240 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 HAUS1Q96CS2 278 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 CABS1Q96KC9 395 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 SPATA33Q96N06 139 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 MPHOSPH6Q99547 160 aaKnown RBP13.63□□□□□ -0.23
CPSF6-201ENST00000266679 INO80BQ9C086 356 aaPredicted RBP13.63□□□□□ -0.23
CPSF6-201ENST00000266679 TXNRD2Q9NNW7 524 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 NXF1Q9UBU9 619 aaKnown RBP13.63□□□□□ -0.23
CPSF6-201ENST00000266679 PPME1Q9Y570 386 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 IVNS1ABPQ9Y6Y0 642 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 TCRBV5S1A1TA0A578 114 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 FOXO6A8MYZ6 492 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 GOLGA8SH3BPF8 625 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 LIASO43766 372 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 GAS2O43903 313 aaKnown RBP13.63□□□□□ -0.23
CPSF6-201ENST00000266679 ECM2O94769 699 aaPredicted RBP13.63□□□□□ -0.23
CPSF6-201ENST00000266679 ASPAP45381 313 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 FBXW10Q5XX13 1052 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 TXNRD3NBQ6F5E7 133 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 SPOCD1Q6ZMY3 1216 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 ERICH1Q86X53 443 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 DHX37Q8IY37 1157 aaKnown RBP13.63□□□□□ -0.23
CPSF6-201ENST00000266679 RCOR2Q8IZ40 523 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 CCDC89Q8N998 374 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 ANKRD36BP1Q96IX9 119 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 MMP19Q99542 508 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 JPH2Q9BR39 696 aaPredicted RBP13.63□□□□□ -0.23
CPSF6-201ENST00000266679 DNPEPQ9ULA0 475 aa13.63□□□□□ -0.23
CPSF6-201ENST00000266679 PDE4DIPQ5VU43 2346 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 IGKV6-21A0A0C4DH24 114 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 SPDYE5A6NIY4 337 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 UNCXA6NJT0 531 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 FSBPO95073 299 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 KRT19P08727 400 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 CXCL8P10145 99 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 CD19P15391 556 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 KLRC2P26717 231 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 ORC1Q13415 861 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 CNGA2Q16280 664 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 P3H1Q32P28 736 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 TSHZ1Q6ZSZ6 1077 aa13.62□□□□□ -0.23
CPSF6-201ENST00000266679 TMEM192Q8IY95 271 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms