RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 MTCH2Q9Y6C9 303 aa15.25■□□□□ 0.03
SSBP1-201ENST00000265304 HIDE1A8MVS5 230 aa15.24■□□□□ 0.03
SSBP1-201ENST00000265304 TEX28O15482 410 aa15.24■□□□□ 0.03
SSBP1-201ENST00000265304 TPM3P06753 285 aa15.24■□□□□ 0.03
SSBP1-201ENST00000265304 LMO2P25791 158 aa15.24■□□□□ 0.03
SSBP1-201ENST00000265304 NDUFV1P49821 464 aa15.24■□□□□ 0.03
SSBP1-201ENST00000265304 MFAP3P55082 362 aa15.24■□□□□ 0.03
SSBP1-201ENST00000265304 JAM2P57087 298 aa15.24■□□□□ 0.03
SSBP1-201ENST00000265304 YWHAEP62258 255 aaKnown RBP15.24■□□□□ 0.03
SSBP1-201ENST00000265304 TPGS2Q68CL5 300 aa15.24■□□□□ 0.03
SSBP1-201ENST00000265304 PRSS55Q6UWB4 352 aaPredicted RBP15.24■□□□□ 0.03
SSBP1-201ENST00000265304 TMEM184AQ6ZMB5 413 aa15.24■□□□□ 0.03
SSBP1-201ENST00000265304 FAM71AQ8IYT1 594 aa15.24■□□□□ 0.03
SSBP1-201ENST00000265304 PPM1KQ8N3J5 372 aa15.24■□□□□ 0.03
SSBP1-201ENST00000265304 OR10T2Q8NGX3 314 aa15.24■□□□□ 0.03
SSBP1-201ENST00000265304 HDAC7Q8WUI4 952 aa15.24■□□□□ 0.03
SSBP1-201ENST00000265304 KAT5Q92993 513 aa15.24■□□□□ 0.03
SSBP1-201ENST00000265304 MRFAP1L1Q96HT8 127 aa15.24■□□□□ 0.03
SSBP1-201ENST00000265304 CDCA3Q99618 268 aaPredicted RBP15.24■□□□□ 0.03
SSBP1-201ENST00000265304 GPR88Q9GZN0 384 aa15.24■□□□□ 0.03
SSBP1-201ENST00000265304 PRDM12Q9H4Q4 367 aa15.24■□□□□ 0.03
SSBP1-201ENST00000265304 UBE2TQ9NPD8 197 aaPredicted RBP15.24■□□□□ 0.03
SSBP1-201ENST00000265304 DDX43Q9NXZ2 648 aaKnown RBP15.24■□□□□ 0.03
SSBP1-201ENST00000265304 DOCK6Q96HP0 2047 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 REV3LO60673 3130 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 EPHB6O15197 1021 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 ADAM12O43184 909 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 PAEPP09466 180 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 KLK7P49862 253 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 RAD23BP54727 409 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 APBA1Q02410 837 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 LRMPQ12912 555 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 CTXN3Q4LDR2 81 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 IQCEQ6IPM2 695 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 RRAGAQ7L523 313 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 LRRTM3Q86VH5 581 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 CEP57Q86XR8 500 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 ZNF461Q8TAF7 563 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 SLC22A17Q8WUG5 538 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 NUP58Q9BVL2 599 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 NT5C1AQ9BXI3 368 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 EMILIN2Q9BXX0 1053 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 ENTPD7Q9NQZ7 604 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 MTMR10Q9NXD2 777 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 DNAJC12Q9UKB3 198 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 KIAA1257Q9ULG3 409 aa15.23■□□□□ 0.03
SSBP1-201ENST00000265304 ZNF638Q14966 1978 aaKnown RBP15.23■□□□□ 0.03
SSBP1-201ENST00000265304 A0A1W2PQJ5 194 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 TULP1O00294 542 aaPredicted RBP15.22■□□□□ 0.03
SSBP1-201ENST00000265304 PES1O00541 588 aaKnown RBP15.22■□□□□ 0.03
SSBP1-201ENST00000265304 VNN2O95498 520 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 ADH1AP07327 375 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 OR1D2P34982 312 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 NDST1P52848 882 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 ROR1Q01973 937 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 ARID5BQ14865 1188 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 MAPRE1Q15691 268 aaKnown RBP15.22■□□□□ 0.03
SSBP1-201ENST00000265304 NFE2Q16621 373 aaPredicted RBP15.22■□□□□ 0.03
SSBP1-201ENST00000265304 DUSP6Q16828 381 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 INTS6LQ5JSJ4 861 aaKnown RBP15.22■□□□□ 0.03
SSBP1-201ENST00000265304 GJB7Q6PEY0 223 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 PPFIBP1Q86W92 1011 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 VSTM4Q8IW00 320 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 SLC4A11Q8NBS3 891 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 MYCBPAPQ8TBZ2 947 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 C2orf15Q8WU43 125 aaKnown RBP15.22■□□□□ 0.03
SSBP1-201ENST00000265304 AUTS2Q8WXX7 1259 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 BAP1Q92560 729 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 TNIP3Q96KP6 325 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 GUCD1Q96NT3 240 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 TWNKQ96RR1 684 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 LSM14BQ9BX40 385 aaKnown RBP15.22■□□□□ 0.03
SSBP1-201ENST00000265304 ELOVL4Q9GZR5 314 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 SNX25Q9H3E2 840 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 NSUN3Q9H649 340 aaKnown RBP15.22■□□□□ 0.03
SSBP1-201ENST00000265304 ABCB6Q9NP58 842 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 CRTAC1Q9NQ79 661 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 AFF4Q9UHB7 1163 aaKnown RBP15.22■□□□□ 0.03
SSBP1-201ENST00000265304 AJAP1Q9UKB5 411 aaPredicted RBP15.22■□□□□ 0.03
SSBP1-201ENST00000265304 FHOD1Q9Y613 1164 aa15.22■□□□□ 0.03
SSBP1-201ENST00000265304 WDR27A2RRH5 827 aa15.21■□□□□ 0.03
SSBP1-201ENST00000265304 A8MXQ7 604 aa15.21■□□□□ 0.03
SSBP1-201ENST00000265304 RNF225M0QZC1 329 aaPredicted RBP15.21■□□□□ 0.03
SSBP1-201ENST00000265304 FOXN3O00409 490 aaPredicted RBP15.21■□□□□ 0.03
SSBP1-201ENST00000265304 CLASP2O75122 1294 aaKnown RBP15.21■□□□□ 0.03
SSBP1-201ENST00000265304 ATF2P15336 505 aa15.21■□□□□ 0.03
SSBP1-201ENST00000265304 PTPN1P18031 435 aaKnown RBP15.21■□□□□ 0.03
SSBP1-201ENST00000265304 RAP1GAPP47736 663 aa15.21■□□□□ 0.03
SSBP1-201ENST00000265304 CLCN4P51793 760 aa15.21■□□□□ 0.03
SSBP1-201ENST00000265304 ZNF75DP51815 510 aa15.21■□□□□ 0.03
SSBP1-201ENST00000265304 MEA1Q16626 185 aa15.21■□□□□ 0.03
SSBP1-201ENST00000265304 CTC1Q2NKJ3 1217 aa15.21■□□□□ 0.03
SSBP1-201ENST00000265304 CFAP221Q4G0U5 840 aa15.21■□□□□ 0.03
SSBP1-201ENST00000265304 TCEAL8Q8IYN2 117 aa15.21■□□□□ 0.03
SSBP1-201ENST00000265304 DCP1BQ8IZD4 617 aaKnown RBP15.21■□□□□ 0.03
SSBP1-201ENST00000265304 B3GALNT2Q8NCR0 500 aa15.21■□□□□ 0.03
SSBP1-201ENST00000265304 NEK11Q8NG66 645 aa15.21■□□□□ 0.03
SSBP1-201ENST00000265304 OR6B3Q8NGW1 331 aa15.21■□□□□ 0.03
SSBP1-201ENST00000265304 FUBP3Q96I24 572 aaKnown RBP eCLIP15.21■□□□□ 0.03
SSBP1-201ENST00000265304 CDX2Q99626 313 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms