RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 CRKLP46109 303 aaKnown RBP12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 CCNHP51946 323 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 RPL26P61254 145 aaKnown RBP12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 AUHQ13825 339 aaKnown RBP12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 LRRC55Q6ZSA7 311 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 RBM46Q8TBY0 533 aaKnown RBP12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 KIAA1683Q9H0B3 1180 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 CLUHO75153 1309 aa12.2□□□□□ -0.46
DNMT3A-201ENST00000264709 QARSP47897 775 aaKnown RBP12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 BNIP1Q12981 228 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 SNRNP35Q16560 246 aaKnown RBP12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 PAFAH2Q99487 392 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 FETUBQ9UGM5 382 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 ZSCAN5CA6NGD5 496 aaPredicted RBP12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 CDK7P50613 346 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 DUPD1Q68J44 220 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 COA7Q96BR5 231 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 TSPAN17Q96FV3 270 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 HMG20AQ9NP66 347 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 NMRK1Q9NWW6 199 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 RABGEF1Q9UJ41 708 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 FLT1P17948 1338 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 APOL1O14791 398 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 TBC1D4O60343 1298 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 THEMIS2Q5TEJ8 643 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 PRMT9Q6P2P2 845 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 ILKAPQ9H0C8 392 aaPredicted RBP12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 TYW5A2RUC4 315 aaKnown RBP12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 KRT72Q14CN4 511 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 ZNF746Q6NUN9 644 aaPredicted RBP12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 KCNV1Q6PIU1 500 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 SPATA18Q8TC71 538 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 PSPC1Q8WXF1 523 aaKnown RBP12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 EIF2AK1Q9BQI3 630 aaKnown RBP12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 TBKBP1A7MCY6 615 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 GOLGA8SH3BPF8 625 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 DDX39AO00148 427 aaKnown RBP12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 S100BP04271 92 aaPredicted RBP12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 MARSP56192 900 aaKnown RBP12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 AVENQ9NQS1 362 aaPredicted RBP12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 XPO7Q9UIA9 1087 aaKnown RBP12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 FAM205AQ6ZU69 1335 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 SIGLEC1Q9BZZ2 1709 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 RP1L1Q8IWN7 2480 aaPredicted RBP12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 SMNDC1O75940 238 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■■□□ 16.2
DNMT3A-201ENST00000264709 EPS8Q12929 822 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 TMEM120AQ9BXJ8 343 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 HSPBP1Q9NZL4 362 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 DMTF1Q9Y222 760 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 AGPSO00116 658 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 ATP6V1B1P15313 513 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 GPD1LQ8N335 351 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.19□□□□□ -0.466e-7■■■■■ 47.1
DNMT3A-201ENST00000264709 MPP4Q96JB8 637 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 PACSIN1Q9BY11 444 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 IGSF9BQ9UPX0 1349 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 MYL2P10916 166 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 ZNF667Q5HYK9 610 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 NDUFAF2Q8N183 169 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 ART4Q93070 314 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 BTBD9Q96Q07 612 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 PCDHA3Q9Y5H8 950 aa12.19□□□□□ -0.46
DNMT3A-201ENST00000264709 TDP2O95551 362 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 SLC9A1P19634 815 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 SCYL2Q6P3W7 929 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 PIGWQ7Z7B1 504 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 TRIM62Q9BVG3 475 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 EHD4Q9H223 541 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 RALAP11233 206 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 CCDC195A0A1B0GUA6 201 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 K7ERI5 159 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 MEIS1O00470 390 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 C1QBPQ07021 282 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 CEP170P1Q96L14 293 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 MSTO1Q9BUK6 570 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 LGALS13Q9UHV8 139 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 MYCLP12524 364 aaPredicted RBP12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 NFKBIAP25963 317 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 HAUS6Q7Z4H7 955 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 TTYH3Q9C0H2 523 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 PLGRKTQ9HBL7 147 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 MPP6Q9NZW5 540 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 ZMYND8Q9ULU4 1186 aaPredicted RBP12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 DDX3XO00571 662 aaKnown RBP eCLIP12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 GLRA3O75311 464 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 FDX1P10109 184 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 BAP1Q92560 729 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 DUSP9Q99956 384 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 THAP2Q9H0W7 228 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 FCHO1O14526 889 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 ZNF699Q32M78 642 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 SCFD2Q8WU76 684 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 METTL5Q9NRN9 209 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 P4HBP07237 508 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 VCPP55072 806 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 OR6Y1Q8NGX8 325 aa12.18□□□□□ -0.46
DNMT3A-201ENST00000264709 LOC102724428A0A0B4J2F2 783 aa12.17□□□□□ -0.46
DNMT3A-201ENST00000264709 SKAP2O75563 359 aaPredicted RBP12.17□□□□□ -0.46
DNMT3A-201ENST00000264709 SIK1P57059 783 aa12.17□□□□□ -0.46
DNMT3A-201ENST00000264709 EIF3EP60228 445 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms