RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 DDX3XO00571 662 aaKnown RBP eCLIP10.38□□□□□ -0.752e-23■■□□□ 11.9
SNRNP40-201ENST00000263694 ARHGAP6O43182 974 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 THAP12O43422 761 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 TACC1O75410 805 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 NDUFA10O95299 355 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 MYOGP15173 224 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 CD19P15391 556 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 ATP2A2P16615 1042 aaKnown RBP10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 TNFAIP3P21580 790 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 TKTP29401 623 aaKnown RBP10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 GNA15P30679 374 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 KIF11P52732 1056 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 YWHAEP62258 255 aaKnown RBP10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 FMO1Q01740 532 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 INCA1Q0VD86 236 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 HS1BP3Q53T59 392 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 PASD1Q8IV76 773 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 HERC6Q8IVU3 1022 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 TOP6BLQ8N6T0 577 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 TMEM176AQ96HP8 235 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 SUSD3Q96L08 255 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 COLEC11Q9BWP8 271 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 DEF6Q9H4E7 631 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 TAS2R14Q9NYV8 317 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 ADAM28Q9UKQ2 775 aa10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 REXO2Q9Y3B8 237 aaKnown RBP10.38□□□□□ -0.75
SNRNP40-201ENST00000263694 GBF1Q92538 1859 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 USP27XA6NNY8 438 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 TMCO5BA8MYB1 307 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 M0QZQ0 153 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 GABRDO14764 452 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 AKR1B10O60218 316 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 ODC1P11926 461 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 WARSP23381 471 aaKnown RBP10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 ALDH7A1P49419 539 aaKnown RBP10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 PDE6CP51160 858 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 PSMC1P62191 440 aaKnown RBP10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 HTRA4P83105 476 aaPredicted RBP10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 RASIP1Q5U651 963 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 FAM171A1Q5VUB5 890 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 KIAA0319Q5VV43 1072 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 KCNT2Q6UVM3 1135 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 SPRED2Q7Z698 418 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 CEP57Q86XR8 500 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 CMTR2Q8IYT2 770 aaKnown RBP10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 SLC30A5Q8TAD4 765 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 ZNF606Q8WXB4 792 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 FAXDC2Q96IV6 333 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 TMEM209Q96SK2 561 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 RTP3Q9BQQ7 232 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 TMEM175Q9BSA9 504 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 VN1R3Q9BXE9 311 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 NT5C1AQ9BXI3 368 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 FAM49BQ9NUQ9 324 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 TRMT1Q9NXH9 659 aaKnown RBP10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 DDX43Q9NXZ2 648 aaKnown RBP10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 STXBP5LQ9Y2K9 1186 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 ZKSCAN5Q9Y2L8 839 aa10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 BZW2Q9Y6E2 419 aaKnown RBP10.37□□□□□ -0.75
SNRNP40-201ENST00000263694 MYH10P35580 1976 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 SSU72P8A0A1W2PR75 194 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 H0YGN5 161 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 TMEM189-UBE2V1I3L0A0 370 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 NRDCO43847 1150 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 TLL1O43897 1013 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 ARHGEF15O94989 841 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 ABL1P00519 1130 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 CCDC172P0C7W6 258 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 BPIFB4P59827 614 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 CDR2Q01850 454 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 OVOS1Q6IE37 1185 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 FUT10Q6P4F1 479 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 SPNS2Q8IVW8 549 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 COLGALT1Q8NBJ5 622 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 RNPC3Q96LT9 517 aaKnown RBP10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 PACSIN1Q9BY11 444 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 PCDHB8Q9UN66 801 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 ADGRG1Q9Y653 693 aa10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 LAMA2P24043 3122 aaKnown RBP10.36□□□□□ -0.75
SNRNP40-201ENST00000263694 RCCD1A6NED2 376 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 EIF3CLB5ME19 914 aaKnown RBP10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 PAEPP09466 180 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 LINC00271P0C7V0 271 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 CCDC130P13994 396 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 PTPN1P18031 435 aaKnown RBP10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 CYLC1P35663 651 aaPredicted RBP10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 C2CD6Q53TS8 623 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 CCDC122Q5T0U0 273 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 PPP1R26Q5T8A7 1209 aaPredicted RBP10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 DENND1BQ6P3S1 775 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 METTL23Q86XA0 190 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 CCDC170Q8IYT3 715 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 TMEM86AQ8N2M4 240 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 FIBCD1Q8N539 461 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 UBA3Q8TBC4 463 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 KIAA1524Q8TCG1 905 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 CPA5Q8WXQ8 436 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 CYFIP2Q96F07 1278 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 IGSF21Q96ID5 467 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms