RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 MICAL2O94851 1124 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 SOX4Q06945 474 aaPredicted RBP16.75■□□□□ 0.27
VPS26A-201ENST00000263559 CNGA2Q16280 664 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 DPH6Q7L8W6 267 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 RPAINQ86UA6 219 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 TTC39CQ8N584 583 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 RAET1EQ8TD07 263 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 NT5C1AQ9BXI3 368 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 GOLGA2P5Q9HBQ8 144 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 EPB41L5Q9HCM4 733 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 TJP2Q9UDY2 1190 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.75■□□□□ 0.27
VPS26A-201ENST00000263559 O00370 1275 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 MAP2K7O14733 419 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 CD4P01730 458 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 THPOP40225 353 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 GUCY2DQ02846 1103 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 MAP9Q49MG5 647 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 SGO2Q562F6 1265 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 SEL1L2Q5TEA6 688 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 DNAJC24Q6P3W2 148 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 ERVK-5Q9HDB9 667 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 GDF3Q9NR23 364 aa16.75■□□□□ 0.27
VPS26A-201ENST00000263559 TMEM191CA6NGB0 347 aa16.74■□□□□ 0.27
VPS26A-201ENST00000263559 CLUL1Q15846 466 aa16.74■□□□□ 0.27
VPS26A-201ENST00000263559 HDXQ7Z353 690 aa16.74■□□□□ 0.27
VPS26A-201ENST00000263559 TSPAN18Q96SJ8 248 aa16.74■□□□□ 0.27
VPS26A-201ENST00000263559 NME7Q9Y5B8 376 aa16.74■□□□□ 0.27
VPS26A-201ENST00000263559 ESYT3A0FGR9 886 aa16.74■□□□□ 0.27
VPS26A-201ENST00000263559 MEIS3P2A8K0S8 358 aa16.74■□□□□ 0.27
VPS26A-201ENST00000263559 XPOTO43592 962 aaKnown RBP16.74■□□□□ 0.27
VPS26A-201ENST00000263559 SOWAHAQ2M3V2 549 aa16.74■□□□□ 0.27
VPS26A-201ENST00000263559 PPP1R15BQ5SWA1 713 aa16.74■□□□□ 0.27
VPS26A-201ENST00000263559 RNF180Q86T96 592 aa16.74■□□□□ 0.27
VPS26A-201ENST00000263559 IFT20Q8IY31 132 aa16.74■□□□□ 0.27
VPS26A-201ENST00000263559 C12orf29Q8N999 325 aa16.74■□□□□ 0.27
VPS26A-201ENST00000263559 MCEEQ96PE7 176 aa16.74■□□□□ 0.27
VPS26A-201ENST00000263559 CPXM1Q96SM3 734 aa16.74■□□□□ 0.27
VPS26A-201ENST00000263559 AGO3Q9H9G7 860 aaKnown RBP16.74■□□□□ 0.27
VPS26A-201ENST00000263559 AMACRQ9UHK6 382 aa16.74■□□□□ 0.27
VPS26A-201ENST00000263559 M0QYV0 167 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 ATF7P17544 494 aaPredicted RBP16.73■□□□□ 0.27
VPS26A-201ENST00000263559 CYP3A5P20815 502 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 ITGA7Q13683 1181 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 FBXO47Q5MNV8 452 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 ZDHHC14Q8IZN3 488 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 C3orf20Q8ND61 904 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.73■□□□□ 0.27
VPS26A-201ENST00000263559 UBA3Q8TBC4 463 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 ZFP42Q96MM3 310 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 GDAP1L1Q96MZ0 367 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 CHST12Q9NRB3 414 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 FAM105AQ9NUU6 356 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 IP6K2Q9UHH9 426 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 STRIP2Q9ULQ0 834 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 USTQ9Y2C2 406 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 PTGESO14684 152 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 SPTLC1O15269 473 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 TNFRSF8P28908 595 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 MAP2K2P36507 400 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 GPD2P43304 727 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 PLA2G4AP47712 749 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 VEGFBP49765 207 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 TAS2R40P59535 323 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 TRADDQ15628 312 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 KCTD19Q17RG1 926 aaPredicted RBP16.73■□□□□ 0.27
VPS26A-201ENST00000263559 DCUN1D2Q6PH85 259 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 PXYLP1Q8TE99 480 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 AENQ8WTP8 325 aaKnown RBP16.73■□□□□ 0.27
VPS26A-201ENST00000263559 SLITRK6Q9H5Y7 841 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 TRMT13Q9NUP7 481 aaKnown RBP16.73■□□□□ 0.27
VPS26A-201ENST00000263559 KIAA1257Q9ULG3 409 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 TCRBV7S2A1N4TA0A589 114 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 KPNA7A9QM74 516 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 RPLP2P05387 115 aaKnown RBP16.73■□□□□ 0.27
VPS26A-201ENST00000263559 CARSP49589 748 aaKnown RBP16.73■□□□□ 0.27
VPS26A-201ENST00000263559 ACLYP53396 1101 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 OGDHQ02218 1023 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 ZNF252P-AS1Q0IIN9 211 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 CASP8Q14790 479 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 ACOT1Q86TX2 421 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 SLC13A5Q86YT5 568 aaPredicted RBP16.73■□□□□ 0.27
VPS26A-201ENST00000263559 C18orf8Q96DM3 657 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 DDX27Q96GQ7 796 aaKnown RBP16.73■□□□□ 0.27
VPS26A-201ENST00000263559 TSPAN16Q9UKR8 245 aa16.73■□□□□ 0.27
VPS26A-201ENST00000263559 GOLGA6L10A0A0M3HER8 536 aa16.72■□□□□ 0.27
VPS26A-201ENST00000263559 GOLGA8SH3BPF8 625 aa16.72■□□□□ 0.27
VPS26A-201ENST00000263559 GPR182O15218 404 aa16.72■□□□□ 0.27
VPS26A-201ENST00000263559 ERBB2P04626 1255 aa16.72■□□□□ 0.27
VPS26A-201ENST00000263559 CBX1P83916 185 aa16.72■□□□□ 0.27
VPS26A-201ENST00000263559 LCLAT1Q6UWP7 414 aa16.72■□□□□ 0.27
VPS26A-201ENST00000263559 CASKIN2Q8WXE0 1202 aa16.72■□□□□ 0.27
VPS26A-201ENST00000263559 BRCA2P51587 3418 aa16.72■□□□□ 0.27
VPS26A-201ENST00000263559 CD52P31358 61 aa16.72■□□□□ 0.27
VPS26A-201ENST00000263559 MAN1A1P33908 653 aa16.72■□□□□ 0.27
VPS26A-201ENST00000263559 PSMC1P62191 440 aaKnown RBP16.72■□□□□ 0.27
VPS26A-201ENST00000263559 LLGL1Q15334 1064 aa16.72■□□□□ 0.27
VPS26A-201ENST00000263559 PPP1R26Q5T8A7 1209 aaPredicted RBP16.72■□□□□ 0.27
VPS26A-201ENST00000263559 PRELID2Q8N945 189 aa16.72■□□□□ 0.27
VPS26A-201ENST00000263559 OR6B3Q8NGW1 331 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms