RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 KLHL14Q9P2G3 628 aa17.27■□□□□ 0.35
TM9SF1-201ENST00000261789 CFAP73A6NFT4 308 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 LDHAP00338 332 aaKnown RBP17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 CETN2P41208 172 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 IRX3P78415 501 aaPredicted RBP17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 NEDD9Q14511 834 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 CDR2LQ86X02 465 aaPredicted RBP17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 IMPG2Q9BZV3 1241 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 ZWILCHQ9H900 591 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 CISHQ9NSE2 258 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 GJA3Q9Y6H8 435 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 hCG_1818297A0A087WSY0 165 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 TCRBV5S1A1TA0A578 114 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 ASMTLO95671 621 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 ASS1P00966 412 aaKnown RBP17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 PIGRP01833 764 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 EZRP15311 586 aaKnown RBP17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 HIRAP54198 1017 aaPredicted RBP17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 GDF10P55107 478 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 OSTNP61366 133 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 IL9RQ01113 521 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 PDIA2Q13087 525 aaKnown RBP17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 ORC1Q13415 861 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 PRKG1Q13976 671 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 ZNF268Q14587 947 aaPredicted RBP17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 EFTUD2Q15029 972 aaKnown RBP eCLIP17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 PPP1R21Q6ZMI0 780 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 MAGEC3Q8TD91 643 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 SLC16A10Q8TF71 515 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 PCYT2Q99447 389 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 TRABDQ9H4I3 376 aa17.26■□□□□ 0.35
TM9SF1-201ENST00000261789 SRGAP2CP0DJJ0 459 aa17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 SLC8A1P32418 973 aa17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 OASLQ15646 514 aaKnown RBP17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 EEPD1Q7L9B9 569 aa17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 ADAMTS5Q9UNA0 930 aa17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 MARK3P27448 753 aa17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 CDKN2BP42772 138 aa17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 GMPSP49915 693 aaPredicted RBP17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 NRLP54845 237 aa17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 LMNB2Q03252 620 aa17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 SLC1A5Q15758 541 aa17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 TFDP3Q5H9I0 405 aa17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 RNASEH2BQ5TBB1 312 aaKnown RBP17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 ANKRD22Q5VYY1 191 aa17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 UBR7Q8N806 425 aa17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 GIMAP7Q8NHV1 300 aa17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 PRPF31Q8WWY3 499 aaKnown RBP17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 N4BP2L2Q92802 583 aaPredicted RBP17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 C12orf65Q9H3J6 166 aaKnown RBP17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 CXorf56Q9H5V9 222 aa17.25■□□□□ 0.35
TM9SF1-201ENST00000261789 PHIPQ8WWQ0 1821 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 ABHD2P08910 425 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 FGFR1P11362 822 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 SSTR1P30872 391 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 RFC1P35251 1148 aaPredicted RBP17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 VCPP55072 806 aaKnown RBP17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 ZNF280AP59817 542 aaPredicted RBP17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 TFAMQ00059 246 aaKnown RBP17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 STXBP2Q15833 593 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 KIRREL3Q8IZU9 778 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 PHTF1Q9UMS5 762 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 ACTL7BQ9Y614 415 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 FAM189A1O60320 539 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 ATG7O95352 703 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 CD48P09326 243 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 IL1R2P27930 398 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 RAP1GAPP47736 663 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 MSS51Q4VC12 460 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 ERICH1Q86X53 443 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 KIAA0319LQ8IZA0 1049 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 DENND1AQ8TEH3 1009 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 MYLK2Q9H1R3 596 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 ARHGEF3Q9NR81 526 aa17.24■□□□□ 0.35
TM9SF1-201ENST00000261789 SPDYE16A6NNV3 312 aaPredicted RBP17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 ADCY3O60266 1144 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 CALB1P05937 261 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 CA4P22748 312 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 GPX6P59796 221 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 MYO1EQ12965 1108 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 MKRN3Q13064 507 aaKnown RBP17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 CATSPERGQ6ZRH7 1159 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 ASRGL1Q7L266 308 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 BRSK2Q8IWQ3 736 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 LRRC71Q8N4P6 559 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 ARFGAP1Q8N6T3 406 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 EMC1Q8N766 993 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 GBP7Q8N8V2 638 aaPredicted RBP17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 JOSD2Q8TAC2 188 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 TMEM237Q96Q45 408 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 MAK16Q9BXY0 300 aaKnown RBP17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 GEMIN8Q9NWZ8 242 aaKnown RBP17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 NXF1Q9UBU9 619 aaKnown RBP17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 GJB1P08034 283 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 UBA1P22314 1058 aaKnown RBP17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 OAZ1P54368 228 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 TFDP1Q14186 410 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 PPP1R15BQ5SWA1 713 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 FNBP1LQ5T0N5 605 aa17.23■□□□□ 0.35
TM9SF1-201ENST00000261789 SYCP2LQ5T4T6 812 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms