RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 LRP10Q7Z4F1 713 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 CCDC60Q8IWA6 550 aaPredicted RBP14.59□□□□□ -0.07
CDH1-201ENST00000261769 USP38Q8NB14 1042 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 COPS5Q92905 334 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 ARHGEF26Q96DR7 871 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 ZNF558Q96NG5 402 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 TMEM134Q9H6X4 195 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 CDY2AQ9Y6F7 541 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 SPATA31C2B4DYI2 1134 aa14.58□□□□□ -0.07
CDH1-201ENST00000261769 NFKBIEO00221 500 aa14.58□□□□□ -0.07
CDH1-201ENST00000261769 TTC4O95801 387 aa14.58□□□□□ -0.07
CDH1-201ENST00000261769 AKT1P31749 480 aa14.58□□□□□ -0.07
CDH1-201ENST00000261769 BRSK2Q8IWQ3 736 aa14.58□□□□□ -0.07
CDH1-201ENST00000261769 ZNF507Q8TCN5 953 aa14.58□□□□□ -0.07
CDH1-201ENST00000261769 TLR8Q9NR97 1041 aaKnown RBP14.58□□□□□ -0.07
CDH1-201ENST00000261769 SUN2Q9UH99 717 aa14.58□□□□□ -0.07
CDH1-201ENST00000261769 TMEM247A6NEH6 219 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 MYL4P12829 197 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 AKAP5P24588 427 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 SOX10P56693 466 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 TMEM119Q4V9L6 283 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 TTC30BQ8N4P2 665 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 SDCCAG3Q96C92 435 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 CHP1Q99653 195 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 PARD6BQ9BYG5 372 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 CELF4Q9BZC1 486 aaKnown RBP14.58□□□□□ -0.08
CDH1-201ENST00000261769 OSBPL8Q9BZF1 889 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 CISHQ9NSE2 258 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 UXTQ9UBK9 157 aaPredicted RBP14.58□□□□□ -0.08
CDH1-201ENST00000261769 F5H423 210 aaPredicted RBP14.58□□□□□ -0.08
CDH1-201ENST00000261769 LSM8O95777 96 aaKnown RBP14.58□□□□□ -0.08
CDH1-201ENST00000261769 BST2Q10589 180 aaKnown RBP14.58□□□□□ -0.08
CDH1-201ENST00000261769 MTHFD1LQ6UB35 978 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 TAS1R2Q8TE23 839 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 SLC7A5P2Q9GIP4 190 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 OLA1Q9NTK5 396 aaKnown RBP14.58□□□□□ -0.08
CDH1-201ENST00000261769 ZFATQ9P243 1243 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 BARX2Q9UMQ3 279 aaPredicted RBP14.58□□□□□ -0.08
CDH1-201ENST00000261769 GTPBP10A4D1E9 387 aaKnown RBP14.58□□□□□ -0.08
CDH1-201ENST00000261769 UNCXA6NJT0 531 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 SMAPO00193 183 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 MEIS2O14770 477 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 FGFR4P22455 802 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 CASP4P49662 377 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 FXR1P51114 621 aaKnown RBP eCLIP14.58□□□□□ -0.08
CDH1-201ENST00000261769 COPS2P61201 443 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 SATB1Q01826 763 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 GABPB1Q06547 395 aaPredicted RBP14.58□□□□□ -0.08
CDH1-201ENST00000261769 EPC2Q52LR7 807 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 HERC6Q8IVU3 1022 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 USP33Q8TEY7 942 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 RIN2Q8WYP3 895 aaPredicted RBP14.58□□□□□ -0.08
CDH1-201ENST00000261769 HAUS8Q9BT25 410 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 FAM96AQ9H5X1 160 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 SUDS3Q9H7L9 328 aaPredicted RBP14.58□□□□□ -0.08
CDH1-201ENST00000261769 PAK5Q9P286 719 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 SLC13A4Q9UKG4 626 aa14.58□□□□□ -0.08
CDH1-201ENST00000261769 ROBO1Q9Y6N7 1651 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 TOMM70O94826 608 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 SESN2P58004 480 aaPredicted RBP14.57□□□□□ -0.08
CDH1-201ENST00000261769 MDH1BQ5I0G3 518 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 LRGUKQ96M69 825 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 AGAP3Q96P47 875 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 RRN3Q9NYV6 651 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 PACSIN2Q9UNF0 486 aaPredicted RBP14.57□□□□□ -0.08
CDH1-201ENST00000261769 PON1P27169 355 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 CASP2P42575 452 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 POU5F1BQ06416 359 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 HIF1AQ16665 826 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 NOVA2Q9UNW9 492 aaKnown RBP14.57□□□□□ -0.08
CDH1-201ENST00000261769 CYP3A7-CYP3A51PA0A087WV96 503 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 SLC12A8A0AV02 714 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 FZD9O00144 591 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 FOXN3O00409 490 aaPredicted RBP14.57□□□□□ -0.08
CDH1-201ENST00000261769 EML1O00423 815 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 PSMD10O75832 226 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 ESRRBO95718 433 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 HIST1H2AGP0C0S8 130 aaPredicted RBP14.57□□□□□ -0.08
CDH1-201ENST00000261769 HIST1H2ADP20671 130 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 CYP3A7P24462 503 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 OCRLQ01968 901 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 CREMQ03060 361 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 WDR75Q8IWA0 830 aaKnown RBP14.57□□□□□ -0.08
CDH1-201ENST00000261769 UNC45BQ8IWX7 931 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 ZBED8Q8IZ13 594 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 TMEM86AQ8N2M4 240 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 BCAS4Q8TDM0 211 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 HIST1H2AHQ96KK5 128 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 HIST1H2AJQ99878 128 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 H2AFJQ9BTM1 129 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 KLHL11Q9NVR0 708 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 PARNO95453 639 aaKnown RBP14.57□□□□□ -0.08
CDH1-201ENST00000261769 PREPLQ4J6C6 727 aaPredicted RBP14.57□□□□□ -0.08
CDH1-201ENST00000261769 SYTL3Q4VX76 610 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 PPM1LQ5SGD2 360 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 GJC2Q5T442 439 aaPredicted RBP14.57□□□□□ -0.08
CDH1-201ENST00000261769 MEI1Q5TIA1 1274 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 TTI2Q6NXR4 508 aa14.57□□□□□ -0.08
CDH1-201ENST00000261769 TBC1D1Q86TI0 1168 aaPredicted RBP14.57□□□□□ -0.08
CDH1-201ENST00000261769 UROC1Q96N76 676 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms