RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 P4HA1P13674 534 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 ITGB5P18084 799 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 VHLP40337 213 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 PIGWQ7Z7B1 504 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 RASSF3Q86WH2 238 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 DNAAF3Q8N9W5 541 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 MTBPQ96DY7 904 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 FBXO40Q9UH90 709 aa18.42■□□□□ 0.54
NDFIP1-201ENST00000253814 GNAT1P11488 350 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 CALB2P22676 271 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 RGS7P49802 495 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 MTMR2Q13614 643 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 MAP7Q14244 749 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 ZNF568Q3ZCX4 644 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 RAPH1Q70E73 1250 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 GMCL1P1Q8NEA9 526 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 NSUN6Q8TEA1 469 aaKnown RBP18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 MIS12Q9H081 205 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 DCLRE1BQ9H816 532 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 RNPEPL1Q9HAU8 725 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 PSTPIP1O43586 416 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 ENTPD3O75355 529 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 RPL7AP62424 266 aaKnown RBP18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 STK32AQ8WU08 396 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 BCL9LQ86UU0 1499 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 DNALI1O14645 258 aaPredicted RBP18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 FSCN2O14926 492 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 PYGBP11216 843 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 POLD1P28340 1107 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 AP2B1P63010 937 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 FASTKD3Q14CZ7 662 aaKnown RBP18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 SNX30Q5VWJ9 437 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 TEX2Q8IWB9 1127 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 EXD1Q8NHP7 514 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 GSDMBQ8TAX9 411 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 MIPOL1Q8TD10 442 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 GLIS2Q9BZE0 524 aaPredicted RBP18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 RPAP3Q9H6T3 665 aaPredicted RBP18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 QTRT2Q9H974 415 aaKnown RBP18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 ZNF302Q9NR11 478 aa18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 DDX56Q9NY93 547 aaKnown RBP18.41■□□□□ 0.54
NDFIP1-201ENST00000253814 PTPN4P29074 926 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 SESN2P58004 480 aaPredicted RBP18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 BMPR2Q13873 1038 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 MAPK6Q16659 721 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 DUOXA2Q1HG44 320 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 NDUFAF2Q8N183 169 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 KCTD17Q8N5Z5 321 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 CDHR1Q96JP9 859 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 SPIRE1Q08AE8 756 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 TNFAIP1Q13829 316 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 CHI3L2Q15782 390 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 PPP1R2P3Q6NXS1 205 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 SPOCD1Q6ZMY3 1216 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 PRPF39Q86UA1 669 aaKnown RBP18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 PPIL6Q8IXY8 311 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 RNF149Q8NC42 400 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 RNF34Q969K3 372 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 MPHOSPH6Q99547 160 aaKnown RBP18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 TMEM120AQ9BXJ8 343 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 MOV10L1Q9BXT6 1211 aaKnown RBP18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 WRAP73Q9P2S5 460 aaPredicted RBP18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 TMX2Q9Y320 296 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 CYP1A2P05177 515 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 TAC1P20366 129 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 TFDP2Q14188 446 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 TFDP3Q5H9I0 405 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 DDX27Q96GQ7 796 aaKnown RBP18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 FOXP3Q9BZS1 431 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 ZNF70Q9UC06 446 aaPredicted RBP18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 STRIP2Q9ULQ0 834 aa18.4■□□□□ 0.54
NDFIP1-201ENST00000253814 VIL1P09327 827 aaKnown RBP18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 THEMIS2Q5TEJ8 643 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 PRAMEF18Q5VWM3 479 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 ISLR2Q6UXK2 745 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 ST13P4Q8IZP2 240 aaPredicted RBP18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 MKL1Q969V6 931 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 MTMR12Q9C0I1 747 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 VCX3AQ9NNX9 186 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 MYH3P11055 1940 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 NUP188Q5SRE5 1749 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 EXTL3O43909 919 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 RFC5P40937 340 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 BNIP1Q12981 228 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 EMC2Q15006 297 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 DCLK2Q8N568 766 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 LENG9Q96B70 501 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 WWP1Q9H0M0 922 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 RPF1Q9H9Y2 349 aaKnown RBP18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 GSCP56915 257 aaPredicted RBP18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 NLRP11P59045 1033 aaKnown RBP18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 ASPHQ12797 758 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 PIGHQ14442 188 aaPredicted RBP18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 KPNB1Q14974 876 aaKnown RBP18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 SULF1Q8IWU6 871 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 ZNF606Q8WXB4 792 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 SLC4A7Q9Y6M7 1214 aa18.39■□□□□ 0.53
NDFIP1-201ENST00000253814 MYBPC2Q14324 1141 aa18.38■□□□□ 0.53
NDFIP1-201ENST00000253814 ABRAQ8N0Z2 381 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms