RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 C9orf57Q5W0N0 161 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 JADE1Q6IE81 842 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 BRAPQ7Z569 592 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 CD302Q8IX05 232 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 MYCT1Q8N699 235 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 OR10T2Q8NGX3 314 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 PSMG2Q969U7 264 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 E2F7Q96AV8 911 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 CALML4Q96GE6 196 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 SENP8Q96LD8 212 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 PGLYRP2Q96PD5 576 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 TMEM209Q96SK2 561 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 MSTO1Q9BUK6 570 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 STRA6Q9BX79 667 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 GPR88Q9GZN0 384 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 KDM4CQ9H3R0 1056 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 RPF1Q9H9Y2 349 aaKnown RBP11.18□□□□□ -0.62
VPS50-201ENST00000251739 SMG5Q9UPR3 1016 aaKnown RBP11.18□□□□□ -0.62
VPS50-201ENST00000251739 C2CD2Q9Y426 696 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 MYO16Q9Y6X6 1858 aa11.18□□□□□ -0.62
VPS50-201ENST00000251739 SDK1Q7Z5N4 2213 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 HELZP42694 1942 aaKnown RBP11.17□□□□□ -0.62
VPS50-201ENST00000251739 MAP1BP46821 2468 aaKnown RBP11.17□□□□□ -0.62
VPS50-201ENST00000251739 CEP295Q9C0D2 2601 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 A0A1W2PRU2 124 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 HEPACAM2A8MVW5 462 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 TISP43B9A030 160 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 ANKRD63C9JTQ0 380 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 CHADO15335 359 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 CHRNB1P11230 501 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 ODC1P11926 461 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 TGM1P22735 817 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 WEE1P30291 646 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 NMT1P30419 496 aaKnown RBP11.17□□□□□ -0.62
VPS50-201ENST00000251739 ABCD1P33897 745 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 MATR3P43243 847 aaKnown RBP eCLIP11.17□□□□□ -0.62
VPS50-201ENST00000251739 GCGRP47871 477 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 MCM2P49736 904 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 EPHB3P54753 998 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 POU5F1Q01860 360 aaKnown RBP11.17□□□□□ -0.62
VPS50-201ENST00000251739 GAS6Q14393 721 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 KMT5BQ4FZB7 885 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 TSSK4Q6SA08 328 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 USP49Q70CQ1 688 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 USP37Q86T82 979 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 ATAD1Q8NBU5 361 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 ATRIPQ8WXE1 791 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 LARP4BQ92615 738 aaKnown RBP11.17□□□□□ -0.62
VPS50-201ENST00000251739 MSANTD3Q96H12 275 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 LRRC3BQ96PB8 259 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 PRR14Q9BWN1 585 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 ASB7Q9H672 318 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 IL21Q9HBE4 155 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 NDRG2Q9UN36 371 aaKnown RBP11.17□□□□□ -0.62
VPS50-201ENST00000251739 ASB3Q9Y575 518 aa11.17□□□□□ -0.62
VPS50-201ENST00000251739 MED19A0JLT2 244 aaPredicted RBP11.16□□□□□ -0.62
VPS50-201ENST00000251739 TBCAO75347 108 aaKnown RBP11.16□□□□□ -0.62
VPS50-201ENST00000251739 PAPSS2O95340 614 aaPredicted RBP11.16□□□□□ -0.62
VPS50-201ENST00000251739 PRAMEF12O95522 483 aa11.16□□□□□ -0.62
VPS50-201ENST00000251739 ATF6P18850 670 aa11.16□□□□□ -0.62
VPS50-201ENST00000251739 ADSSP30520 456 aa11.16□□□□□ -0.62
VPS50-201ENST00000251739 DHX8Q14562 1220 aaKnown RBP11.16□□□□□ -0.62
VPS50-201ENST00000251739 PUM1Q14671 1186 aaKnown RBP eCLIP11.16□□□□□ -0.62
VPS50-201ENST00000251739 TMEM132DQ14C87 1099 aa11.16□□□□□ -0.62
VPS50-201ENST00000251739 PTPAQ15257 358 aa11.16□□□□□ -0.62
VPS50-201ENST00000251739 SF3A1Q15459 793 aaKnown RBP11.16□□□□□ -0.62
VPS50-201ENST00000251739 ZC2HC1CQ53FD0 456 aaPredicted RBP11.16□□□□□ -0.62
VPS50-201ENST00000251739 LARP1BQ659C4 914 aaKnown RBP11.16□□□□□ -0.62
VPS50-201ENST00000251739 CRELD2Q6UXH1 353 aaPredicted RBP11.16□□□□□ -0.62
VPS50-201ENST00000251739 DSTYKQ6XUX3 929 aa11.16□□□□□ -0.62
VPS50-201ENST00000251739 DNAJB7Q7Z6W7 309 aaPredicted RBP11.16□□□□□ -0.62
VPS50-201ENST00000251739 EFCAB13Q8IY85 973 aa11.16□□□□□ -0.62
VPS50-201ENST00000251739 FAM3CQ92520 227 aa11.16□□□□□ -0.62
VPS50-201ENST00000251739 HVCN1Q96D96 273 aa11.16□□□□□ -0.62
VPS50-201ENST00000251739 ZCWPW1Q9H0M4 648 aa11.16□□□□□ -0.62
VPS50-201ENST00000251739 IKZF4Q9H2S9 585 aa11.16□□□□□ -0.62
VPS50-201ENST00000251739 PLSCR2Q9NRY7 297 aa11.16□□□□□ -0.62
VPS50-201ENST00000251739 OBP2AQ9NY56 170 aa11.16□□□□□ -0.62
VPS50-201ENST00000251739 SMC3Q9UQE7 1217 aa11.16□□□□□ -0.62
VPS50-201ENST00000251739 SLC27A5Q9Y2P5 690 aa11.16□□□□□ -0.62
VPS50-201ENST00000251739 ATG2BQ96BY7 2078 aa11.16□□□□□ -0.62
VPS50-201ENST00000251739 USP24Q9UPU5 2620 aa11.15□□□□□ -0.62
VPS50-201ENST00000251739 MYBPHLA2RUH7 354 aa11.15□□□□□ -0.62
VPS50-201ENST00000251739 ZNF263O14978 683 aa11.15□□□□□ -0.62
VPS50-201ENST00000251739 ACTN4O43707 911 aaKnown RBP11.15□□□□□ -0.62
VPS50-201ENST00000251739 SOAT2O75908 522 aa11.15□□□□□ -0.62
VPS50-201ENST00000251739 FGF19O95750 216 aa11.15□□□□□ -0.62
VPS50-201ENST00000251739 DDIT3P35638 169 aa11.15□□□□□ -0.62
VPS50-201ENST00000251739 ALDH1A3P47895 512 aa11.15□□□□□ -0.62
VPS50-201ENST00000251739 ACOT2P49753 483 aa11.15□□□□□ -0.62
VPS50-201ENST00000251739 CUL4AQ13619 759 aa11.15□□□□□ -0.62
VPS50-201ENST00000251739 C1orf228Q6PIY5 440 aa11.15□□□□□ -0.62
VPS50-201ENST00000251739 TXNDC11Q6PKC3 985 aa11.15□□□□□ -0.62
VPS50-201ENST00000251739 ZNF720Q7Z2F6 126 aa11.15□□□□□ -0.62
VPS50-201ENST00000251739 ARID3BQ8IVW6 561 aaPredicted RBP11.15□□□□□ -0.62
VPS50-201ENST00000251739 DNAJC19Q96DA6 116 aa11.15□□□□□ -0.62
VPS50-201ENST00000251739 HINFPQ9BQA5 517 aa11.15□□□□□ -0.62
VPS50-201ENST00000251739 SLITRK6Q9H5Y7 841 aa11.15□□□□□ -0.62
VPS50-201ENST00000251739 LMAN1LQ9HAT1 526 aa11.15□□□□□ -0.62
VPS50-201ENST00000251739 NCDNQ9UBB6 729 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms