RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 MAIP1Q8WWC4 291 aa17.96■□□□□ 0.47
FOXA1-201ENST00000250448 FAM212AQ96EL1 285 aa17.96■□□□□ 0.47
FOXA1-201ENST00000250448 MAGEB18Q96M61 343 aa17.96■□□□□ 0.47
FOXA1-201ENST00000250448 PPP1R16BQ96T49 567 aa17.96■□□□□ 0.47
FOXA1-201ENST00000250448 ST6GALNAC4Q9H4F1 302 aa17.96■□□□□ 0.47
FOXA1-201ENST00000250448 VTA1Q9NP79 307 aa17.96■□□□□ 0.47
FOXA1-201ENST00000250448 HNRNPDLO14979 420 aaKnown RBP17.95■□□□□ 0.46
FOXA1-201ENST00000250448 LGR5O75473 907 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 GAS8O95995 478 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 MSH2P43246 934 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 ACVR2BQ13705 512 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 CYP4X1Q8N118 509 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 SPIRE2Q8WWL2 714 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 PRPF31Q8WWY3 499 aaKnown RBP17.95■□□□□ 0.46
FOXA1-201ENST00000250448 SEMA4DQ92854 862 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 NTPCRQ9BSD7 190 aaKnown RBP17.95■□□□□ 0.46
FOXA1-201ENST00000250448 NKIRAS1Q9NYS0 192 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 STK38LQ9Y2H1 464 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 CEP350Q5VT06 3117 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 EDN1P05305 212 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 RNF43Q68DV7 783 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 C17orf99Q6UX52 265 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 ARHGEF18Q6ZSZ5 1173 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 TRAIPQ9BWF2 469 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 DCLK3Q9C098 648 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 ANAPC7Q9UJX3 599 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 ANAPC5Q9UJX4 755 aa17.95■□□□□ 0.46
FOXA1-201ENST00000250448 SLC15A5A6NIM6 579 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 LGALS2P05162 132 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 SRGAP2CP0DJJ0 459 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 CTGFP29279 349 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 ARL2P36404 184 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 LACTBP83111 547 aaPredicted RBP17.94■□□□□ 0.46
FOXA1-201ENST00000250448 ACAD10Q6JQN1 1059 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 ZNF513Q8N8E2 541 aaPredicted RBP17.94■□□□□ 0.46
FOXA1-201ENST00000250448 HERPUD2Q9BSE4 406 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 KLHL14Q9P2G3 628 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 ARHGAP28Q9P2N2 729 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 TRIM33Q9UPN9 1127 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 TTLL13PA6NNM8 815 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 MGAT5Q09328 741 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 STRN3Q13033 797 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 CAPSQ13938 189 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 MTFR1Q15390 333 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 SRRM1Q8IYB3 904 aaKnown RBP17.94■□□□□ 0.46
FOXA1-201ENST00000250448 DEPTORQ8TB45 409 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 CCDC127Q96BQ5 260 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 ZBTB45Q96K62 511 aaPredicted RBP17.94■□□□□ 0.46
FOXA1-201ENST00000250448 TRIM7Q9C029 511 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 BATF3Q9NR55 127 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 TBK1Q9UHD2 729 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 EVPLQ92817 2033 aa17.94■□□□□ 0.46
FOXA1-201ENST00000250448 DIAPH2O60879 1101 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 MAFO75444 373 aaPredicted RBP17.93■□□□□ 0.46
FOXA1-201ENST00000250448 CCNB1P14635 433 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 PAX7P23759 505 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 CLCN3P51790 818 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 MORN1Q5T089 497 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 HELQQ8TDG4 1101 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 POMGNT1Q8WZA1 660 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 ELMO3Q96BJ8 720 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 PWWP2AQ96N64 755 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 ZNF570Q96NI8 536 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 ARHGAP39Q9C0H5 1083 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 SMARCAD1Q9H4L7 1026 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 CDH16O75309 829 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 ADCY8P40145 1251 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 SKIV2L2P42285 1042 aaKnown RBP17.93■□□□□ 0.46
FOXA1-201ENST00000250448 VPS41P49754 854 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 MAP2K5Q13163 448 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 LAMC2Q13753 1193 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 CLEC16AQ2KHT3 1053 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 PLPPR4Q7Z2D5 763 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 ZNF467Q7Z7K2 595 aaPredicted RBP17.93■□□□□ 0.46
FOXA1-201ENST00000250448 ERICH1Q86X53 443 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 ANKLE1Q8NAG6 615 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 DDX1Q92499 740 aaKnown RBP17.93■□□□□ 0.46
FOXA1-201ENST00000250448 C17orf75Q9HAS0 396 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 CCDC15Q0P6D6 951 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 PPP1R21Q6ZMI0 780 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 ECHDC2Q86YB7 292 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 GRAMD1AQ96CP6 724 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 FAXDC2Q96IV6 333 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 NAALADL1Q9UQQ1 740 aa17.93■□□□□ 0.46
FOXA1-201ENST00000250448 HGSO14964 777 aaPredicted RBP17.92■□□□□ 0.46
FOXA1-201ENST00000250448 TAC1P20366 129 aa17.92■□□□□ 0.46
FOXA1-201ENST00000250448 RFC5P40937 340 aa17.92■□□□□ 0.46
FOXA1-201ENST00000250448 KRT39Q6A163 491 aa17.92■□□□□ 0.46
FOXA1-201ENST00000250448 FAM167AQ96KS9 214 aa17.92■□□□□ 0.46
FOXA1-201ENST00000250448 NT5C1BQ96P26 610 aa17.92■□□□□ 0.46
FOXA1-201ENST00000250448 ABHD16BQ9H3Z7 469 aa17.92■□□□□ 0.46
FOXA1-201ENST00000250448 ADAM22Q9P0K1 906 aa17.92■□□□□ 0.46
FOXA1-201ENST00000250448 EXOC7Q9UPT5 735 aa17.92■□□□□ 0.46
FOXA1-201ENST00000250448 R3HDM2Q9Y2K5 976 aaKnown RBP17.92■□□□□ 0.46
FOXA1-201ENST00000250448 ACTL7BQ9Y614 415 aa17.92■□□□□ 0.46
FOXA1-201ENST00000250448 AOC2O75106 756 aa17.92■□□□□ 0.46
FOXA1-201ENST00000250448 HARSP12081 509 aaKnown RBP17.92■□□□□ 0.46
FOXA1-201ENST00000250448 RTP1P59025 263 aa17.92■□□□□ 0.46
FOXA1-201ENST00000250448 SNRPFP62306 86 aaKnown RBP17.92■□□□□ 0.46
FOXA1-201ENST00000250448 ATP11AP98196 1134 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms