RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 EPN3Q9H201 632 aa22.93■■□□□ 1.26
CLN6-201ENST00000249806 RRP15Q9Y3B9 282 aaKnown RBP22.93■■□□□ 1.26
CLN6-201ENST00000249806 GOLGA8SH3BPF8 625 aa22.93■■□□□ 1.26
CLN6-201ENST00000249806 NDUFAB1O14561 156 aa22.93■■□□□ 1.26
CLN6-201ENST00000249806 ATF7P17544 494 aaPredicted RBP22.93■■□□□ 1.26
CLN6-201ENST00000249806 ADCY8P40145 1251 aa22.93■■□□□ 1.26
CLN6-201ENST00000249806 ITGA8P53708 1063 aa22.93■■□□□ 1.26
CLN6-201ENST00000249806 RHBDF2Q6PJF5 856 aa22.93■■□□□ 1.26
CLN6-201ENST00000249806 DPP9Q86TI2 863 aa22.93■■□□□ 1.26
CLN6-201ENST00000249806 HOOK3Q86VS8 718 aa22.93■■□□□ 1.26
CLN6-201ENST00000249806 IFNLR1Q8IU57 520 aaPredicted RBP22.93■■□□□ 1.26
CLN6-201ENST00000249806 TLCD1Q96CP7 247 aa22.93■■□□□ 1.26
CLN6-201ENST00000249806 SCLT1Q96NL6 688 aa22.93■■□□□ 1.26
CLN6-201ENST00000249806 SLITRK1Q96PX8 696 aa22.93■■□□□ 1.26
CLN6-201ENST00000249806 DNAJC17Q9NVM6 304 aaKnown RBP22.93■■□□□ 1.26
CLN6-201ENST00000249806 FEZ2Q9UHY8 353 aaPredicted RBP22.93■■□□□ 1.26
CLN6-201ENST00000249806 NEU2Q9Y3R4 380 aa22.93■■□□□ 1.26
CLN6-201ENST00000249806 CENPFP49454 3210 aa22.93■■□□□ 1.26
CLN6-201ENST00000249806 KAT6AQ92794 2004 aa22.93■■□□□ 1.26
CLN6-201ENST00000249806 STRNO43815 780 aa22.92■■□□□ 1.26
CLN6-201ENST00000249806 RFC1P35251 1148 aaPredicted RBP22.92■■□□□ 1.26
CLN6-201ENST00000249806 YWHAEP62258 255 aaKnown RBP22.92■■□□□ 1.26
CLN6-201ENST00000249806 SYDE1Q6ZW31 735 aaPredicted RBP22.92■■□□□ 1.26
CLN6-201ENST00000249806 ILDR2Q71H61 639 aa22.92■■□□□ 1.26
CLN6-201ENST00000249806 RCOR2Q8IZ40 523 aa22.92■■□□□ 1.26
CLN6-201ENST00000249806 C3orf20Q8ND61 904 aa22.92■■□□□ 1.26
CLN6-201ENST00000249806 EMID1Q96A84 441 aaPredicted RBP22.92■■□□□ 1.26
CLN6-201ENST00000249806 PWWP2AQ96N64 755 aa22.92■■□□□ 1.26
CLN6-201ENST00000249806 DDX23Q9BUQ8 820 aaKnown RBP22.92■■□□□ 1.26
CLN6-201ENST00000249806 PPANQ9NQ55 473 aaKnown RBP22.92■■□□□ 1.26
CLN6-201ENST00000249806 HOMER3Q9NSC5 361 aa22.92■■□□□ 1.26
CLN6-201ENST00000249806 SMPD1P17405 629 aa22.92■■□□□ 1.26
CLN6-201ENST00000249806 TNFAIP2Q03169 654 aa22.92■■□□□ 1.26
CLN6-201ENST00000249806 MARCH8Q5T0T0 291 aa22.92■■□□□ 1.26
CLN6-201ENST00000249806 SLC4A11Q8NBS3 891 aa22.92■■□□□ 1.26
CLN6-201ENST00000249806 EPS8L3Q8TE67 593 aaKnown RBP22.92■■□□□ 1.26
CLN6-201ENST00000249806 RAPGEF5Q92565 580 aa22.92■■□□□ 1.26
CLN6-201ENST00000249806 ECM2O94769 699 aaPredicted RBP22.91■■□□□ 1.26
CLN6-201ENST00000249806 KRT1P04264 644 aa22.91■■□□□ 1.26
CLN6-201ENST00000249806 SLCO1A2P46721 670 aa22.91■■□□□ 1.26
CLN6-201ENST00000249806 GPR142Q7Z601 462 aa22.91■■□□□ 1.26
CLN6-201ENST00000249806 FAM129AQ9BZQ8 928 aa22.91■■□□□ 1.26
CLN6-201ENST00000249806 ELOVL4Q9GZR5 314 aa22.91■■□□□ 1.26
CLN6-201ENST00000249806 CDC42EP4Q9H3Q1 356 aaKnown RBP22.91■■□□□ 1.26
CLN6-201ENST00000249806 ATF2P15336 505 aa22.9■■□□□ 1.26
CLN6-201ENST00000249806 POLR2BP30876 1174 aaKnown RBP22.9■■□□□ 1.26
CLN6-201ENST00000249806 GTF2A2P52657 109 aa22.9■■□□□ 1.26
CLN6-201ENST00000249806 PIGHQ14442 188 aaPredicted RBP22.9■■□□□ 1.26
CLN6-201ENST00000249806 JOSD2Q8TAC2 188 aa22.9■■□□□ 1.26
CLN6-201ENST00000249806 PPP1R13LQ8WUF5 828 aa22.9■■□□□ 1.26
CLN6-201ENST00000249806 CPXM1Q96SM3 734 aa22.9■■□□□ 1.26
CLN6-201ENST00000249806 LHX5Q9H2C1 402 aa22.9■■□□□ 1.26
CLN6-201ENST00000249806 ZSWIM8A7E2V4 1837 aa22.9■■□□□ 1.26
CLN6-201ENST00000249806 IFI35P80217 286 aaPredicted RBP22.9■■□□□ 1.26
CLN6-201ENST00000249806 BYSLQ13895 437 aaKnown RBP22.9■■□□□ 1.26
CLN6-201ENST00000249806 GRIK4Q16099 956 aa22.9■■□□□ 1.26
CLN6-201ENST00000249806 KIAA0319LQ8IZA0 1049 aa22.9■■□□□ 1.26
CLN6-201ENST00000249806 RBM41Q96IZ5 413 aaKnown RBP22.9■■□□□ 1.26
CLN6-201ENST00000249806 ASB7Q9H672 318 aa22.9■■□□□ 1.26
CLN6-201ENST00000249806 ANAPC5Q9UJX4 755 aa22.9■■□□□ 1.26
CLN6-201ENST00000249806 DNPEPQ9ULA0 475 aa22.9■■□□□ 1.26
CLN6-201ENST00000249806 IQCA1LA6NCM1 817 aa22.89■■□□□ 1.26
CLN6-201ENST00000249806 EBAG9O00559 213 aa22.89■■□□□ 1.26
CLN6-201ENST00000249806 MED7O43513 233 aa22.89■■□□□ 1.26
CLN6-201ENST00000249806 TSPAN1O60635 241 aa22.89■■□□□ 1.26
CLN6-201ENST00000249806 ACSL3O95573 720 aa22.89■■□□□ 1.26
CLN6-201ENST00000249806 KRT3P12035 628 aa22.89■■□□□ 1.26
CLN6-201ENST00000249806 ZNF365Q70YC5 407 aa22.89■■□□□ 1.26
CLN6-201ENST00000249806 PNMA8AQ86V59 439 aaPredicted RBP22.89■■□□□ 1.26
CLN6-201ENST00000249806 MDM1Q8TC05 714 aa22.89■■□□□ 1.26
CLN6-201ENST00000249806 PGM2Q96G03 612 aa22.89■■□□□ 1.26
CLN6-201ENST00000249806 MAML3Q96JK9 1138 aa22.89■■□□□ 1.26
CLN6-201ENST00000249806 MORF4L1Q9UBU8 362 aa22.89■■□□□ 1.26
CLN6-201ENST00000249806 AGAP1Q9UPQ3 857 aa22.89■■□□□ 1.26
CLN6-201ENST00000249806 TRIP11Q15643 1979 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 E7EVH7 732 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 ADCY6O43306 1168 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 CILPO75339 1184 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 PAEPP09466 180 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 CETN2P41208 172 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 PSMC1P62191 440 aaKnown RBP22.89■■□□□ 1.25
CLN6-201ENST00000249806 TAP1Q03518 808 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 PTPN11Q06124 597 aaPredicted RBP22.89■■□□□ 1.25
CLN6-201ENST00000249806 LRRC38Q5VT99 294 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 SPOCD1Q6ZMY3 1216 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 GSTA5Q7RTV2 222 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 ZNF467Q7Z7K2 595 aaPredicted RBP22.89■■□□□ 1.25
CLN6-201ENST00000249806 GLIS1Q8NBF1 620 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 TMEM176AQ96HP8 235 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 HPDLQ96IR7 371 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 TRAIPQ9BWF2 469 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 CXCL16Q9H2A7 254 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 STRIP2Q9ULQ0 834 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 GINS2Q9Y248 185 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 COL1A2P08123 1366 aa22.89■■□□□ 1.25
CLN6-201ENST00000249806 RGS16O15492 202 aaPredicted RBP22.88■■□□□ 1.25
CLN6-201ENST00000249806 GCLCP48506 637 aaPredicted RBP22.88■■□□□ 1.25
CLN6-201ENST00000249806 TMEM62Q0P6H9 643 aa22.88■■□□□ 1.25
CLN6-201ENST00000249806 TMEM132DQ14C87 1099 aa22.88■■□□□ 1.25
CLN6-201ENST00000249806 DPH6Q7L8W6 267 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms