RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 A0A1W2PRU2 124 aa22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 MOSPD3O75425 235 aa22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 MICAL2O94851 1124 aa22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 ZNF202O95125 648 aa22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 TUFMP49411 452 aaKnown RBP22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 DPYDQ12882 1025 aa22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 VEPH1Q14D04 833 aa22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 FAM78AQ5JUQ0 283 aa22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 ITIH5Q86UX2 942 aa22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 OSTM1Q86WC4 334 aa22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 TMC8Q8IU68 726 aa22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 TOP6BLQ8N6T0 577 aa22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 SHKBP1Q8TBC3 707 aa22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 SPPL2BQ8TCT7 592 aa22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 C2orf15Q8WU43 125 aaKnown RBP22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 ARHGEF3Q9NR81 526 aa22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 ASB3Q9Y575 518 aa22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 PCDHB5Q9Y5E4 795 aa22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 NUP210Q8TEM1 1887 aaPredicted RBP22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 MIA3Q5JRA6 1907 aa22.7■■□□□ 1.22
HCFC1R1-201ENST00000248089 COL4A3Q01955 1670 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 GOLGA6L4A6NEF3 574 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 HCRTO43612 131 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 ECI2O75521 394 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 CLSTN1O94985 981 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 NPR3P17342 541 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 ATF6P18850 670 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 CASP4P49662 377 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 CLCN5P51795 746 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 SMARCB1Q12824 385 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 TAF12Q16514 161 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 TANGO2Q6ICL3 276 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 DNAJB7Q7Z6W7 309 aaPredicted RBP22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 GIPC2Q8TF65 315 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 PSMG2Q969U7 264 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 ZSWIM3Q96MP5 696 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 PRRX2Q99811 253 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 PLA2G2FQ9BZM2 168 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 KCTD10Q9H3F6 313 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 ZNF334Q9HCZ1 680 aaPredicted RBP22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 TMLHEQ9NVH6 421 aa22.69■■□□□ 1.22
HCFC1R1-201ENST00000248089 OBSL1O75147 1896 aa22.68■■□□□ 1.22
HCFC1R1-201ENST00000248089 FCARP24071 287 aa22.68■■□□□ 1.22
HCFC1R1-201ENST00000248089 PTPN5P54829 565 aa22.68■■□□□ 1.22
HCFC1R1-201ENST00000248089 NHLH1Q02575 133 aa22.68■■□□□ 1.22
HCFC1R1-201ENST00000248089 SOWAHAQ2M3V2 549 aa22.68■■□□□ 1.22
HCFC1R1-201ENST00000248089 INTS6LQ5JSJ4 861 aaKnown RBP22.68■■□□□ 1.22
HCFC1R1-201ENST00000248089 ELSPBP1Q96BH3 223 aa22.68■■□□□ 1.22
HCFC1R1-201ENST00000248089 ASB16Q96NS5 453 aa22.68■■□□□ 1.22
HCFC1R1-201ENST00000248089 MMS19Q96T76 1030 aa22.68■■□□□ 1.22
HCFC1R1-201ENST00000248089 ACBD6Q9BR61 282 aa22.68■■□□□ 1.22
HCFC1R1-201ENST00000248089 PI4K2AQ9BTU6 479 aa22.68■■□□□ 1.22
HCFC1R1-201ENST00000248089 LRRC3Q9BY71 257 aa22.68■■□□□ 1.22
HCFC1R1-201ENST00000248089 TBC1D17Q9HA65 648 aa22.68■■□□□ 1.22
HCFC1R1-201ENST00000248089 ZFP14Q9HCL3 533 aa22.68■■□□□ 1.22
HCFC1R1-201ENST00000248089 MAPK8IP1Q9UQF2 711 aa22.68■■□□□ 1.22
HCFC1R1-201ENST00000248089 DENND4CQ5VZ89 1909 aa22.68■■□□□ 1.22
HCFC1R1-201ENST00000248089 TICRRQ7Z2Z1 1910 aa22.68■■□□□ 1.22
HCFC1R1-201ENST00000248089 PHACTR2O75167 634 aa22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 RHOBTB3O94955 611 aa22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 NR3C1P04150 777 aa22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 HAPLN1P10915 354 aaPredicted RBP22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 AOC1P19801 751 aa22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 GABRR2P28476 465 aa22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 PCSK1P29120 753 aa22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 LHX1P48742 406 aa22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 TRPC3Q13507 836 aa22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 GRM2Q14416 872 aa22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 NFE2Q16621 373 aaPredicted RBP22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 CCDC142Q17RM4 750 aa22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 ZSCAN18Q8TBC5 510 aaPredicted RBP22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 SPATA18Q8TC71 538 aa22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 SMARCD2Q92925 531 aa22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 CCDC34Q96HJ3 373 aa22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 GZF1Q9H116 711 aaPredicted RBP22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 ZNF638Q14966 1978 aaKnown RBP22.67■■□□□ 1.22
HCFC1R1-201ENST00000248089 PDXKO00764 312 aa22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 PI15O43692 258 aa22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 CALUO43852 315 aaPredicted RBP22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 KIF20AO95235 890 aa22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 CST3P01034 146 aaPredicted RBP22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 PSMC1P62191 440 aaKnown RBP22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 TCF15Q12870 199 aa22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 BIRC3Q13489 604 aa22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 SNW1Q13573 536 aaKnown RBP22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 STXBP5Q5T5C0 1151 aa22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 CEP135Q66GS9 1140 aa22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 STKLD1Q8NE28 680 aa22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 PLEKHO2Q8TD55 490 aa22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 ZNF516Q92618 1163 aa22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 GCNAQ96QF7 691 aa22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 ATXN3LQ9H3M9 355 aa22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 DMAC2Q9NW81 257 aa22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 GTF3C4Q9UKN8 822 aa22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 PTPRDP23468 1912 aa22.66■■□□□ 1.22
HCFC1R1-201ENST00000248089 LRRIQ3A6PVS8 624 aaPredicted RBP22.65■■□□□ 1.22
HCFC1R1-201ENST00000248089 GABRDO14764 452 aa22.65■■□□□ 1.22
HCFC1R1-201ENST00000248089 FGF19O95750 216 aa22.65■■□□□ 1.22
HCFC1R1-201ENST00000248089 GPR15P49685 360 aa22.65■■□□□ 1.22
HCFC1R1-201ENST00000248089 TNNC1P63316 161 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms