RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 C9IYK1 514 aa15.06■□□□□ 0
SDF2-201ENST00000247020 ATMINO43313 823 aaPredicted RBP15.06■□□□□ 0
SDF2-201ENST00000247020 SETSIPP0DME0 302 aa15.06■□□□□ 0
SDF2-201ENST00000247020 CAPN2P17655 700 aa15.06■□□□□ 0
SDF2-201ENST00000247020 WARSP23381 471 aaKnown RBP15.06■□□□□ 0
SDF2-201ENST00000247020 RRM1P23921 792 aa15.06■□□□□ 0
SDF2-201ENST00000247020 FAM189BP81408 668 aa15.06■□□□□ 0
SDF2-201ENST00000247020 MBTPS1Q14703 1052 aa15.06■□□□□ 0
SDF2-201ENST00000247020 ARHGAP17Q68EM7 881 aa15.06■□□□□ 0
SDF2-201ENST00000247020 SLC24A5Q71RS6 500 aa15.06■□□□□ 0
SDF2-201ENST00000247020 ERICH1Q86X53 443 aa15.06■□□□□ 0
SDF2-201ENST00000247020 CRYBG2Q8N1P7 616 aa15.06■□□□□ 0
SDF2-201ENST00000247020 GPR161Q8N6U8 529 aaKnown RBP15.06■□□□□ 0
SDF2-201ENST00000247020 UBL4BQ8N7F7 174 aa15.06■□□□□ 0
SDF2-201ENST00000247020 LRRN4CLQ8ND94 238 aa15.06■□□□□ 0
SDF2-201ENST00000247020 ACTRT1Q8TDG2 376 aa15.06■□□□□ 0
SDF2-201ENST00000247020 COG1Q8WTW3 980 aa15.06■□□□□ 0
SDF2-201ENST00000247020 APBB2Q92870 758 aa15.06■□□□□ 0
SDF2-201ENST00000247020 DDX27Q96GQ7 796 aaKnown RBP15.06■□□□□ 0
SDF2-201ENST00000247020 HEXIM2Q96MH2 286 aaKnown RBP15.06■□□□□ 0
SDF2-201ENST00000247020 MRPL45Q9BRJ2 306 aaKnown RBP15.06■□□□□ 0
SDF2-201ENST00000247020 CARD9Q9H257 536 aa15.06■□□□□ 0
SDF2-201ENST00000247020 TTC7AQ9ULT0 858 aaPredicted RBP15.06■□□□□ 0
SDF2-201ENST00000247020 TSC2P49815 1807 aa15.05■□□□□ -0
SDF2-201ENST00000247020 CCDC66A2RUB6 948 aa15.05■□□□□ -0
SDF2-201ENST00000247020 MEIS3P2A8K0S8 358 aa15.05■□□□□ -0
SDF2-201ENST00000247020 ZNF185O15231 689 aa15.05■□□□□ -0
SDF2-201ENST00000247020 MICAL2O94851 1124 aa15.05■□□□□ -0
SDF2-201ENST00000247020 TUBBP07437 444 aa15.05■□□□□ -0
SDF2-201ENST00000247020 CTNNA2P26232 953 aa15.05■□□□□ -0
SDF2-201ENST00000247020 GABRB2P47870 512 aa15.05■□□□□ -0
SDF2-201ENST00000247020 SCNN1GP51170 649 aa15.05■□□□□ -0
SDF2-201ENST00000247020 ERCC6LQ2NKX8 1250 aa15.05■□□□□ -0
SDF2-201ENST00000247020 C1orf53Q5VUE5 145 aa15.05■□□□□ -0
SDF2-201ENST00000247020 MMS22LQ6ZRQ5 1243 aa15.05■□□□□ -0
SDF2-201ENST00000247020 ANKRD33Q7Z3H0 272 aa15.05■□□□□ -0
SDF2-201ENST00000247020 TMEM86AQ8N2M4 240 aa15.05■□□□□ -0
SDF2-201ENST00000247020 RASGEF1CQ8N431 466 aa15.05■□□□□ -0
SDF2-201ENST00000247020 WDTC1Q8N5D0 677 aa15.05■□□□□ -0
SDF2-201ENST00000247020 C3orf20Q8ND61 904 aa15.05■□□□□ -0
SDF2-201ENST00000247020 KBTBD7Q8WVZ9 684 aa15.05■□□□□ -0
SDF2-201ENST00000247020 RSPH1Q8WYR4 309 aa15.05■□□□□ -0
SDF2-201ENST00000247020 ANKRD7Q92527 254 aa15.05■□□□□ -0
SDF2-201ENST00000247020 LPPQ93052 612 aa15.05■□□□□ -0
SDF2-201ENST00000247020 CAPZA3Q96KX2 299 aa15.05■□□□□ -0
SDF2-201ENST00000247020 GOLGA2P5Q9HBQ8 144 aa15.05■□□□□ -0
SDF2-201ENST00000247020 ANAPC7Q9UJX3 599 aa15.05■□□□□ -0
SDF2-201ENST00000247020 PACSIN2Q9UNF0 486 aaPredicted RBP15.05■□□□□ -0
SDF2-201ENST00000247020 TCRBV5S1A1TA0A578 114 aa15.04■□□□□ -0
SDF2-201ENST00000247020 MYO1FO00160 1098 aa15.04■□□□□ -0
SDF2-201ENST00000247020 PODXLO00592 558 aa15.04■□□□□ -0
SDF2-201ENST00000247020 KCNK3O14649 394 aa15.04■□□□□ -0
SDF2-201ENST00000247020 SPTLC1O15269 473 aa15.04■□□□□ -0
SDF2-201ENST00000247020 DDX3YO15523 660 aaKnown RBP15.04■□□□□ -0
SDF2-201ENST00000247020 MAN1A1P33908 653 aa15.04■□□□□ -0
SDF2-201ENST00000247020 GPD2P43304 727 aa15.04■□□□□ -0
SDF2-201ENST00000247020 AARSP49588 968 aaKnown RBP eCLIP15.04■□□□□ -0
SDF2-201ENST00000247020 SNX16P57768 344 aa15.04■□□□□ -0
SDF2-201ENST00000247020 MAMLD1Q13495 774 aa15.04■□□□□ -0
SDF2-201ENST00000247020 DENND1BQ6P3S1 775 aa15.04■□□□□ -0
SDF2-201ENST00000247020 FBXO46Q6PJ61 603 aaPredicted RBP15.04■□□□□ -0
SDF2-201ENST00000247020 CTU1Q7Z7A3 348 aaKnown RBP15.04■□□□□ -0
SDF2-201ENST00000247020 OR6B3Q8NGW1 331 aa15.04■□□□□ -0
SDF2-201ENST00000247020 CD101Q93033 1021 aa15.04■□□□□ -0
SDF2-201ENST00000247020 TNIP3Q96KP6 325 aa15.04■□□□□ -0
SDF2-201ENST00000247020 TOX2Q96NM4 488 aa15.04■□□□□ -0
SDF2-201ENST00000247020 SNX25Q9H3E2 840 aa15.04■□□□□ -0
SDF2-201ENST00000247020 GOLPH3Q9H4A6 298 aa15.04■□□□□ -0
SDF2-201ENST00000247020 ELAC1Q9H777 363 aaKnown RBP15.04■□□□□ -0
SDF2-201ENST00000247020 MIOSQ9NXC5 875 aa15.04■□□□□ -0
SDF2-201ENST00000247020 ARHGEF37A1IGU5 675 aa15.03■□□□□ -0
SDF2-201ENST00000247020 A8MXQ7 604 aa15.03■□□□□ -0
SDF2-201ENST00000247020 M0QYV0 167 aa15.03■□□□□ -0
SDF2-201ENST00000247020 GNL1P36915 607 aaPredicted RBP15.03■□□□□ -0
SDF2-201ENST00000247020 TUSC3Q13454 348 aa15.03■□□□□ -0
SDF2-201ENST00000247020 ZNF268Q14587 947 aaPredicted RBP15.03■□□□□ -0
SDF2-201ENST00000247020 MESDQ14696 234 aa15.03■□□□□ -0
SDF2-201ENST00000247020 ELF2Q15723 593 aa15.03■□□□□ -0
SDF2-201ENST00000247020 PKN2Q16513 984 aaKnown RBP15.03■□□□□ -0
SDF2-201ENST00000247020 PLEKHG4Q58EX7 1191 aa15.03■□□□□ -0
SDF2-201ENST00000247020 TEX35Q5T0J7 233 aa15.03■□□□□ -0
SDF2-201ENST00000247020 ADGRF2Q8IZF7 708 aa15.03■□□□□ -0
SDF2-201ENST00000247020 MMGT1Q8N4V1 131 aa15.03■□□□□ -0
SDF2-201ENST00000247020 ANKLE1Q8NAG6 615 aa15.03■□□□□ -0
SDF2-201ENST00000247020 FEZF2Q8TBJ5 459 aa15.03■□□□□ -0
SDF2-201ENST00000247020 STK32AQ8WU08 396 aa15.03■□□□□ -0
SDF2-201ENST00000247020 CYLDQ9NQC7 956 aa15.03■□□□□ -0
SDF2-201ENST00000247020 RNF216Q9NWF9 866 aaPredicted RBP15.03■□□□□ -0
SDF2-201ENST00000247020 TSPAN16Q9UKR8 245 aa15.03■□□□□ -0
SDF2-201ENST00000247020 L1RE1Q9UN81 338 aa15.03■□□□□ -0
SDF2-201ENST00000247020 PGRMC1O00264 195 aaKnown RBP15.02■□□□□ -0
SDF2-201ENST00000247020 PDE2AO00408 941 aaPredicted RBP15.02■□□□□ -0
SDF2-201ENST00000247020 GABRDO14764 452 aa15.02■□□□□ -0
SDF2-201ENST00000247020 TFRCP02786 760 aaKnown RBP15.02■□□□□ -0
SDF2-201ENST00000247020 COMTP21964 271 aa15.02■□□□□ -0
SDF2-201ENST00000247020 CXCR5P32302 372 aa15.02■□□□□ -0
SDF2-201ENST00000247020 CTNNA1P35221 906 aaKnown RBP15.02■□□□□ -0
SDF2-201ENST00000247020 LHX1P48742 406 aa15.02■□□□□ -0
SDF2-201ENST00000247020 UPP1Q16831 310 aa15.02■□□□□ -0
SDF2-201ENST00000247020 PTPN20Q4JDL3 420 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms