RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 PAPOLBQ9NRJ5 636 aaKnown RBP16.34■□□□□ 0.21
DDX55-201ENST00000238146 DLGAP2Q9P1A6 1054 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 SCINQ9Y6U3 715 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 PLSCR1O15162 318 aa16.33■□□□□ 0.21
DDX55-201ENST00000238146 KRT36O76013 467 aa16.33■□□□□ 0.21
DDX55-201ENST00000238146 IFNB1P01574 187 aa16.33■□□□□ 0.21
DDX55-201ENST00000238146 KRT1P04264 644 aa16.33■□□□□ 0.21
DDX55-201ENST00000238146 GNAT1P11488 350 aa16.33■□□□□ 0.21
DDX55-201ENST00000238146 GLRA2P23416 452 aa16.33■□□□□ 0.21
DDX55-201ENST00000238146 PAPOLAP51003 745 aaKnown RBP16.33■□□□□ 0.21
DDX55-201ENST00000238146 VCPP55072 806 aaKnown RBP16.33■□□□□ 0.21
DDX55-201ENST00000238146 KPNB1Q14974 876 aaKnown RBP16.33■□□□□ 0.21
DDX55-201ENST00000238146 SEPT7Q16181 437 aaKnown RBP16.33■□□□□ 0.21
DDX55-201ENST00000238146 BRDTQ58F21 947 aaPredicted RBP16.33■□□□□ 0.21
DDX55-201ENST00000238146 ZC3H12AQ5D1E8 599 aaKnown RBP16.33■□□□□ 0.21
DDX55-201ENST00000238146 MZB1Q8WU39 189 aa16.33■□□□□ 0.21
DDX55-201ENST00000238146 SENP7Q9BQF6 1050 aa16.33■□□□□ 0.21
DDX55-201ENST00000238146 MANSC1Q9H8J5 431 aa16.33■□□□□ 0.21
DDX55-201ENST00000238146 PIDD1Q9HB75 910 aa16.33■□□□□ 0.21
DDX55-201ENST00000238146 SLC17A7Q9P2U7 560 aa16.33■□□□□ 0.21
DDX55-201ENST00000238146 LRCH1Q9Y2L9 728 aa16.33■□□□□ 0.21
DDX55-201ENST00000238146 IVNS1ABPQ9Y6Y0 642 aa16.33■□□□□ 0.21
DDX55-201ENST00000238146 NFIBO00712 420 aa16.33■□□□□ 0.2
DDX55-201ENST00000238146 HLA-DRAP01903 254 aa16.33■□□□□ 0.2
DDX55-201ENST00000238146 RFC5P40937 340 aa16.33■□□□□ 0.2
DDX55-201ENST00000238146 PSMC5P62195 406 aa16.33■□□□□ 0.2
DDX55-201ENST00000238146 OCRLQ01968 901 aa16.33■□□□□ 0.2
DDX55-201ENST00000238146 MTMR1Q13613 665 aa16.33■□□□□ 0.2
DDX55-201ENST00000238146 HIF1AQ16665 826 aa16.33■□□□□ 0.2
DDX55-201ENST00000238146 WDR44Q5JSH3 913 aa16.33■□□□□ 0.2
DDX55-201ENST00000238146 ADGRD1Q6QNK2 874 aa16.33■□□□□ 0.2
DDX55-201ENST00000238146 TRIM72Q6ZMU5 477 aa16.33■□□□□ 0.2
DDX55-201ENST00000238146 SPOCD1Q6ZMY3 1216 aa16.33■□□□□ 0.2
DDX55-201ENST00000238146 PRR11Q96HE9 360 aaPredicted RBP16.33■□□□□ 0.2
DDX55-201ENST00000238146 NSL1Q96IY1 281 aa16.33■□□□□ 0.2
DDX55-201ENST00000238146 LBHD1Q9BQE6 289 aaPredicted RBP16.33■□□□□ 0.2
DDX55-201ENST00000238146 NTPCRQ9BSD7 190 aaKnown RBP16.33■□□□□ 0.2
DDX55-201ENST00000238146 TRIM55Q9BYV6 548 aa16.33■□□□□ 0.2
DDX55-201ENST00000238146 VPS11Q9H270 941 aa16.33■□□□□ 0.2
DDX55-201ENST00000238146 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.33■□□□□ 0.2
DDX55-201ENST00000238146 IP6K2Q9UHH9 426 aa16.33■□□□□ 0.2
DDX55-201ENST00000238146 UBR3Q6ZT12 1888 aa16.33■□□□□ 0.2
DDX55-201ENST00000238146 GOLGA8RI6L899 631 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 HNRNPDLO14979 420 aaKnown RBP16.32■□□□□ 0.2
DDX55-201ENST00000238146 AP1ARQ63HQ0 302 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 OR52E8Q6IFG1 317 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 TMEM270Q6UE05 265 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 LRRC6Q86X45 466 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 BANPQ8N9N5 519 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 SCG3Q8WXD2 468 aaKnown RBP16.32■□□□□ 0.2
DDX55-201ENST00000238146 PRMT6Q96LA8 375 aaPredicted RBP16.32■□□□□ 0.2
DDX55-201ENST00000238146 PAFAH2Q99487 392 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 KLF6Q99612 283 aaPredicted RBP16.32■□□□□ 0.2
DDX55-201ENST00000238146 DHRS4Q9BTZ2 278 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 ALG13Q9NP73 1137 aaKnown RBP16.32■□□□□ 0.2
DDX55-201ENST00000238146 TBC1D22BQ9NU19 505 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 PARVAQ9NVD7 372 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 FETUBQ9UGM5 382 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 GYG2O15488 501 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 TBX10O75333 385 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 NPR1P16066 1061 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 SERPINB3P29508 390 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 GNA15P30679 374 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 WNT7BP56706 349 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 FKBP1AP62942 108 aaKnown RBP16.32■□□□□ 0.2
DDX55-201ENST00000238146 PLCB3Q01970 1234 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 C1QBPQ07021 282 aaKnown RBP16.32■□□□□ 0.2
DDX55-201ENST00000238146 ZACNQ401N2 412 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 MSS51Q4VC12 460 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 TXNRD3NBQ6F5E7 133 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 ANO5Q75V66 913 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 NKD2Q969F2 451 aaPredicted RBP16.32■□□□□ 0.2
DDX55-201ENST00000238146 TUBB6Q9BUF5 446 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 KCNK13Q9HB14 408 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 PCDH9Q9HC56 1237 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 FBXO6Q9NRD1 293 aaPredicted RBP16.32■□□□□ 0.2
DDX55-201ENST00000238146 METTL5Q9NRN9 209 aaKnown RBP16.32■□□□□ 0.2
DDX55-201ENST00000238146 ANKEF1Q9NU02 776 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 FARP1Q9Y4F1 1045 aaPredicted RBP16.32■□□□□ 0.2
DDX55-201ENST00000238146 hCG_1818297A0A087WSY0 165 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 SGK1O00141 431 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 CAPN9O14815 690 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 TM9SF1O15321 606 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 PLA2G6O60733 806 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 ATP9AO75110 1047 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 CCNE2O96020 404 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 ITGAVP06756 1048 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 ARFIP2P53365 341 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 SLC34A1Q06495 639 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 MCL1Q07820 350 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 ZNF252P-AS1Q0IIN9 211 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 RCN2Q14257 317 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 RNF220Q5VTB9 566 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 TDRD10Q5VZ19 366 aaKnown RBP16.32■□□□□ 0.2
DDX55-201ENST00000238146 C3orf62Q6ZUJ4 267 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 FAM160B2Q86V87 743 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 PYROXD1Q8WU10 500 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 WDR60Q8WVS4 1066 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 SPIRE2Q8WWL2 714 aa16.32■□□□□ 0.2
DDX55-201ENST00000238146 ACSF2Q96CM8 615 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms