RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 EFR3BQ9Y2G0 817 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 RBM47A0AV96 593 aaKnown RBP17.1■□□□□ 0.33
UBE3D-201ENST00000237186 SIGLEC16A6NMB1 481 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 MED7O43513 233 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 LIASO43766 372 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 INSRRP14616 1297 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 ATICP31939 592 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 SSR1P43307 286 aaKnown RBP17.1■□□□□ 0.33
UBE3D-201ENST00000237186 LACTBP83111 547 aaPredicted RBP17.1■□□□□ 0.33
UBE3D-201ENST00000237186 KYAT1Q16773 422 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 ZNF667Q5HYK9 610 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 TAPT1Q6NXT6 567 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 MFSD7Q6UXD7 560 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 ARMCX2Q7L311 632 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 C1orf127Q8N9H9 656 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 MDM1Q8TC05 714 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 EPS8L3Q8TE67 593 aaKnown RBP17.1■□□□□ 0.33
UBE3D-201ENST00000237186 PPM1EQ8WY54 764 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 EMID1Q96A84 441 aaPredicted RBP17.1■□□□□ 0.33
UBE3D-201ENST00000237186 FAM124BQ9H5Z6 455 aaPredicted RBP17.1■□□□□ 0.33
UBE3D-201ENST00000237186 CCDC134Q9H6E4 229 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 IQCA1LA6NCM1 817 aa17.09■□□□□ 0.33
UBE3D-201ENST00000237186 CPP00450 1065 aa17.09■□□□□ 0.33
UBE3D-201ENST00000237186 CXCL8P10145 99 aa17.09■□□□□ 0.33
UBE3D-201ENST00000237186 TCF4P15884 667 aa17.09■□□□□ 0.33
UBE3D-201ENST00000237186 SNAPC2Q13487 334 aa17.09■□□□□ 0.33
UBE3D-201ENST00000237186 TRIP13Q15645 432 aaPredicted RBP17.09■□□□□ 0.33
UBE3D-201ENST00000237186 ZNF792Q3KQV3 632 aa17.09■□□□□ 0.33
UBE3D-201ENST00000237186 HIBCHQ6NVY1 386 aaPredicted RBP17.09■□□□□ 0.33
UBE3D-201ENST00000237186 SPOCD1Q6ZMY3 1216 aa17.09■□□□□ 0.33
UBE3D-201ENST00000237186 TAOK1Q7L7X3 1001 aa17.09■□□□□ 0.33
UBE3D-201ENST00000237186 TMEM192Q8IY95 271 aa17.09■□□□□ 0.33
UBE3D-201ENST00000237186 DDX23Q9BUQ8 820 aaKnown RBP17.09■□□□□ 0.33
UBE3D-201ENST00000237186 CYP3A43Q9HB55 503 aa17.09■□□□□ 0.33
UBE3D-201ENST00000237186 WDR35Q9P2L0 1181 aa17.09■□□□□ 0.33
UBE3D-201ENST00000237186 hCG_1818297A0A087WSY0 165 aa17.08■□□□□ 0.33
UBE3D-201ENST00000237186 LACTBL1A8MY62 500 aa17.08■□□□□ 0.33
UBE3D-201ENST00000237186 ANKRD65E5RJM6 399 aa17.08■□□□□ 0.33
UBE3D-201ENST00000237186 KRT1P04264 644 aa17.08■□□□□ 0.33
UBE3D-201ENST00000237186 STAG3L1P0CL83 205 aa17.08■□□□□ 0.33
UBE3D-201ENST00000237186 CHN1P15882 459 aa17.08■□□□□ 0.33
UBE3D-201ENST00000237186 RAD23BP54727 409 aa17.08■□□□□ 0.33
UBE3D-201ENST00000237186 OSTNP61366 133 aa17.08■□□□□ 0.33
UBE3D-201ENST00000237186 PTPN20Q4JDL3 420 aa17.08■□□□□ 0.33
UBE3D-201ENST00000237186 TFDP3Q5H9I0 405 aa17.08■□□□□ 0.33
UBE3D-201ENST00000237186 DENND1BQ6P3S1 775 aa17.08■□□□□ 0.33
UBE3D-201ENST00000237186 MAMDC4Q6UXC1 1216 aa17.08■□□□□ 0.33
UBE3D-201ENST00000237186 TADA2BQ86TJ2 420 aa17.08■□□□□ 0.33
UBE3D-201ENST00000237186 IPO4Q8TEX9 1081 aaKnown RBP17.08■□□□□ 0.33
UBE3D-201ENST00000237186 ATXN2LQ8WWM7 1075 aaKnown RBP17.08■□□□□ 0.33
UBE3D-201ENST00000237186 VTA1Q9NP79 307 aa17.08■□□□□ 0.33
UBE3D-201ENST00000237186 NXF1Q9UBU9 619 aaKnown RBP17.08■□□□□ 0.33
UBE3D-201ENST00000237186 PNMA3Q9UL41 463 aa17.08■□□□□ 0.33
UBE3D-201ENST00000237186 POLIQ9UNA4 740 aa17.08■□□□□ 0.33
UBE3D-201ENST00000237186 COL1A2P08123 1366 aa17.08■□□□□ 0.33
UBE3D-201ENST00000237186 GH1P01241 217 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 LGALS2P05162 132 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 GJA5P36382 358 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 CDKN2BP42772 138 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 SLC20A2Q08357 652 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 WDR72Q3MJ13 1102 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 WDR78Q5VTH9 848 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 SCARA5Q6ZMJ2 495 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 CDR2LQ86X02 465 aaPredicted RBP17.07■□□□□ 0.32
UBE3D-201ENST00000237186 PPTC7Q8NI37 304 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 UHMK1Q8TAS1 419 aaKnown RBP17.07■□□□□ 0.32
UBE3D-201ENST00000237186 NKD2Q969F2 451 aaPredicted RBP17.07■□□□□ 0.32
UBE3D-201ENST00000237186 CHMP6Q96FZ7 201 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 ZNF668Q96K58 619 aaPredicted RBP17.07■□□□□ 0.32
UBE3D-201ENST00000237186 ZNF317Q96PQ6 595 aaPredicted RBP17.07■□□□□ 0.32
UBE3D-201ENST00000237186 EFCC1Q9HA90 598 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 NINJ2Q9NZG7 142 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 DDX20Q9UHI6 824 aaKnown RBP17.07■□□□□ 0.32
UBE3D-201ENST00000237186 PI4K2BG5E9Z4 385 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 CILPO75339 1184 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 NFICP08651 508 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 KRT3P12035 628 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 KRT10P13645 584 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 DRD4P21917 467 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 RFC1P35251 1148 aaPredicted RBP17.07■□□□□ 0.32
UBE3D-201ENST00000237186 GJC1P36383 396 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 ZNF268Q14587 947 aaPredicted RBP17.07■□□□□ 0.32
UBE3D-201ENST00000237186 OASLQ15646 514 aaKnown RBP17.07■□□□□ 0.32
UBE3D-201ENST00000237186 TAZQ16635 292 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 KYNUQ16719 465 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 TMEM132AQ24JP5 1023 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 IZUMO3Q5VZ72 239 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 EXOC3L1Q86VI1 746 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 ZCCHC9Q8N567 271 aaKnown RBP17.07■□□□□ 0.32
UBE3D-201ENST00000237186 ALLCQ8N6M5 410 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 ZBTB10Q96DT7 871 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 FRMD8P1Q9BZ68 369 aaPredicted RBP17.07■□□□□ 0.32
UBE3D-201ENST00000237186 PDZD7Q9H5P4 517 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 CYTH4Q9UIA0 394 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 DNPEPQ9ULA0 475 aa17.07■□□□□ 0.32
UBE3D-201ENST00000237186 A0A087WZ62 844 aa17.06■□□□□ 0.32
UBE3D-201ENST00000237186 UNCXA6NJT0 531 aa17.06■□□□□ 0.32
UBE3D-201ENST00000237186 KIAA0754O94854 1291 aa17.06■□□□□ 0.32
UBE3D-201ENST00000237186 ACSL3O95573 720 aa17.06■□□□□ 0.32
UBE3D-201ENST00000237186 STAU1O95793 577 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms