RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 CSADQ9Y600 493 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.4■□□□□ 0.22
CTSD-201ENST00000236671 VWA5AO00534 786 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 PRPF4O43172 522 aaKnown RBP eCLIP16.4■□□□□ 0.227e-7■■■□□ 14.8
CTSD-201ENST00000236671 AOC2O75106 756 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 SPAG7O75391 227 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 PECAM1P16284 738 aaPredicted RBP16.4■□□□□ 0.22
CTSD-201ENST00000236671 ABCD1P33897 745 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 MSH2P43246 934 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 SP4Q02446 784 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 ZNF252P-AS1Q0IIN9 211 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 MTMR2Q13614 643 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 ZBTB41Q5SVQ8 909 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 KAZNQ674X7 775 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 MFSD7Q6UXD7 560 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 C15orf41Q9Y2V0 281 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 STARD13Q9Y3M8 1113 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 DOCK5Q9H7D0 1870 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 TMEM191CA6NGB0 347 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 HGSO14964 777 aaPredicted RBP16.39■□□□□ 0.21
CTSD-201ENST00000236671 UNC5CO95185 931 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 ANP32DO95626 131 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 KRT1P04264 644 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 TMEM191BP0C7N4 346 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 ETS1P14921 441 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 MMP8P22894 467 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 ARSEP51690 589 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 ZNF132P52740 706 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 NOP14P78316 857 aaKnown RBP16.39■□□□□ 0.21
CTSD-201ENST00000236671 EMC2Q15006 297 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 MTERF2Q49AM1 385 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 PPP1R2P3Q6NXS1 205 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 ATG4CQ96DT6 458 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 TRABDQ9H4I3 376 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 KIF9Q9HAQ2 790 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 CREBZFQ9NS37 354 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 ZNF148Q9UQR1 794 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 KIAA1217Q5T5P2 1943 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 MKI67P46013 3256 aaKnown RBP16.39■□□□□ 0.21
CTSD-201ENST00000236671 TJP3O95049 919 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 PIGRP01833 764 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 ATF7P17544 494 aaPredicted RBP16.39■□□□□ 0.21
CTSD-201ENST00000236671 CCND1P24385 295 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 TBXAS1P24557 533 aaPredicted RBP16.39■□□□□ 0.21
CTSD-201ENST00000236671 CETN2P41208 172 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 SLC18A1P54219 525 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 ACTR2P61160 394 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 PDE4CQ08493 712 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 GPS1Q13098 491 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 ABHD15Q6UXT9 468 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 RGS9BPQ6ZS82 235 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 OR5B17Q8NGF7 314 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 NSMCE1Q8WV22 266 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 SPOCK2Q92563 424 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 KCNN1Q92952 543 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 SLC10A4Q96EP9 437 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 ZBTB45Q96K62 511 aaPredicted RBP16.39■□□□□ 0.21
CTSD-201ENST00000236671 CGRRF1Q99675 332 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 PAIP2Q9BPZ3 127 aaKnown RBP16.39■□□□□ 0.21
CTSD-201ENST00000236671 SLC9A2Q9UBY0 812 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 GRID1Q9ULK0 1009 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 STK38LQ9Y2H1 464 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 SIP14410 1827 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 PARP14Q460N5 1801 aa16.39■□□□□ 0.21
CTSD-201ENST00000236671 RPSAP08865 295 aaKnown RBP16.38■□□□□ 0.21
CTSD-201ENST00000236671 MCL1Q07820 350 aa16.38■□□□□ 0.21
CTSD-201ENST00000236671 DNAJC3Q13217 504 aa16.38■□□□□ 0.21
CTSD-201ENST00000236671 MOGSQ13724 837 aa16.38■□□□□ 0.21
CTSD-201ENST00000236671 MORF4L2Q15014 288 aa16.38■□□□□ 0.21
CTSD-201ENST00000236671 OASLQ15646 514 aaKnown RBP16.38■□□□□ 0.21
CTSD-201ENST00000236671 PKN2Q16513 984 aaKnown RBP16.38■□□□□ 0.21
CTSD-201ENST00000236671 LRRC38Q5VT99 294 aa16.38■□□□□ 0.21
CTSD-201ENST00000236671 SCARA3Q6AZY7 606 aa16.38■□□□□ 0.21
CTSD-201ENST00000236671 SPOCD1Q6ZMY3 1216 aa16.38■□□□□ 0.21
CTSD-201ENST00000236671 RASAL3Q86YV0 1011 aa16.38■□□□□ 0.21
CTSD-201ENST00000236671 UBR7Q8N806 425 aa16.38■□□□□ 0.21
CTSD-201ENST00000236671 ASAP3Q8TDY4 903 aa16.38■□□□□ 0.21
CTSD-201ENST00000236671 MYLK2Q9H1R3 596 aa16.38■□□□□ 0.21
CTSD-201ENST00000236671 NOP53Q9NZM5 478 aaKnown RBP16.38■□□□□ 0.21
CTSD-201ENST00000236671 IVNS1ABPQ9Y6Y0 642 aa16.38■□□□□ 0.21
CTSD-201ENST00000236671 TCRBV5S1A1TA0A578 114 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 FAM155AB1AL88 458 aaPredicted RBP16.37■□□□□ 0.21
CTSD-201ENST00000236671 POC1B-GALNT4F8VUJ3 575 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 GBP2P32456 591 aaPredicted RBP16.37■□□□□ 0.21
CTSD-201ENST00000236671 PTPN7P35236 360 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 POLGP54098 1239 aaPredicted RBP16.37■□□□□ 0.21
CTSD-201ENST00000236671 SPARCL1Q14515 664 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 XKR3Q5GH77 459 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 HP1BP3Q5SSJ5 553 aaPredicted RBP16.37■□□□□ 0.21
CTSD-201ENST00000236671 RNASEH2BQ5TBB1 312 aaKnown RBP16.37■□□□□ 0.21
CTSD-201ENST00000236671 RGMBQ6NW40 437 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 FBF1Q8TES7 1133 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 ZNF606Q8WXB4 792 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 TMEM143Q96AN5 459 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 PICK1Q9NRD5 415 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 PHTF1Q9UMS5 762 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 SMG5Q9UPR3 1016 aaKnown RBP16.37■□□□□ 0.21
CTSD-201ENST00000236671 DRG1Q9Y295 367 aaKnown RBP16.37■□□□□ 0.21
CTSD-201ENST00000236671 CNTNAP2Q9UHC6 1331 aa16.37■□□□□ 0.21
CTSD-201ENST00000236671 hCG_1818297A0A087WSY0 165 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms