RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 VPS45Q9NRW7 570 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 GNPTGQ9UJJ9 305 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 CLEC11AQ9Y240 323 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 PLCH2O75038 1416 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 KCNQ3O43525 872 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 TBX10O75333 385 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 C3orf62Q6ZUJ4 267 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 RHOT1Q8IXI2 618 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 FAM178BQ8IXR5 827 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 PLEKHO2Q8TD55 490 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 TBCKQ8TEA7 893 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 DIS3LQ8TF46 1054 aaKnown RBP13.44□□□□□ -0.26
VAMP4-201ENST00000236192 DLG3Q92796 817 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 WRNIP1Q96S55 665 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 FLT1P17948 1338 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.44□□□□□ -0.26
VAMP4-201ENST00000236192 RWDD4Q6NW29 188 aaKnown RBP13.44□□□□□ -0.26
VAMP4-201ENST00000236192 ZNF790Q6PG37 636 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 TRMT1LQ7Z2T5 733 aaKnown RBP13.44□□□□□ -0.26
VAMP4-201ENST00000236192 SAPCD2Q86UD0 394 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 RNF25Q96BH1 459 aaPredicted RBP13.44□□□□□ -0.26
VAMP4-201ENST00000236192 FAF2Q96CS3 445 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 CLK4Q9HAZ1 481 aaKnown RBP13.44□□□□□ -0.26
VAMP4-201ENST00000236192 RPRD1BQ9NQG5 326 aaKnown RBP13.44□□□□□ -0.26
VAMP4-201ENST00000236192 ATP6V1HQ9UI12 483 aa13.44□□□□□ -0.26
VAMP4-201ENST00000236192 NPHP4O75161 1426 aaPredicted RBP13.44□□□□□ -0.26
VAMP4-201ENST00000236192 CENPXA8MT69 81 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 SNX16P57768 344 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 SLC10A5Q5PT55 438 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 SCARA3Q6AZY7 606 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 SH3RF1Q7Z6J0 888 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 POU5F2Q8N7G0 328 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 RWDD3Q9Y3V2 267 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 WASF2Q9Y6W5 498 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 BTNL10A8MVZ5 291 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 KIAA0391O15091 583 aaKnown RBP13.43□□□□□ -0.26
VAMP4-201ENST00000236192 NR3C1P04150 777 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 RPA3P35244 121 aaPredicted RBP13.43□□□□□ -0.26
VAMP4-201ENST00000236192 NEDD8Q15843 81 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 AOC3Q16853 763 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 NADK2Q4G0N4 442 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 GALNT6Q8NCL4 622 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 GIPC2Q8TF65 315 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 COPS7BQ9H9Q2 264 aaPredicted RBP13.43□□□□□ -0.26
VAMP4-201ENST00000236192 SLC38A10Q9HBR0 1119 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 CDC42BPBQ9Y5S2 1711 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 PIK3CDO00329 1044 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 GSTA4O15217 222 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 WDR47O94967 919 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 ATP2B4P23634 1241 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 DCUN1D1Q96GG9 259 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 SENP7Q9BQF6 1050 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 TLK1Q9UKI8 766 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 ZMYM2Q9UBW7 1377 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 WDR64B1ANS9 1081 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 TM7SF2O76062 418 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 TNNC2P02585 160 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 ALBP02768 609 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 SNRPAP09012 282 aaKnown RBP13.43□□□□□ -0.26
VAMP4-201ENST00000236192 TUBP50607 506 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 NEK5Q6P3R8 708 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 HPS3Q969F9 1004 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 SLC39A3Q9BRY0 314 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 ZNF510Q9Y2H8 683 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 PCDHGA3Q9Y5H0 932 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 RPA1P27694 616 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 HNRNPH3P31942 346 aaKnown RBP13.43□□□□□ -0.26
VAMP4-201ENST00000236192 CLK1P49759 484 aaKnown RBP13.43□□□□□ -0.26
VAMP4-201ENST00000236192 NT5DC3Q86UY8 548 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 IGDCC4Q8TDY8 1250 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 LRRC59Q96AG4 307 aaKnown RBP13.43□□□□□ -0.26
VAMP4-201ENST00000236192 INTS2Q9H0H0 1204 aaKnown RBP13.43□□□□□ -0.26
VAMP4-201ENST00000236192 NEUROG2Q9H2A3 272 aa13.43□□□□□ -0.26
VAMP4-201ENST00000236192 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
VAMP4-201ENST00000236192 PPP2R5DQ14738 602 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 OR52E8Q6IFG1 317 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 PDPRQ8NCN5 879 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 GRPEL2Q8TAA5 225 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 CNDP1Q96KN2 507 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 VPS11Q9H270 941 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 CHKBQ9Y259 395 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 CDY2AQ9Y6F7 541 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 CDY1Q9Y6F8 540 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 ABCA9Q8IUA7 1624 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 SNPHO15079 494 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 SLC26A4O43511 780 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 RALGDSQ12967 914 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 ORC2Q13416 577 aaPredicted RBP13.42□□□□□ -0.26
VAMP4-201ENST00000236192 PROSER3Q2NL68 480 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 ATG14Q6ZNE5 492 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 OSBPL11Q9BXB4 747 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 KLC2Q9H0B6 622 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 SH3PXD2BA1X283 911 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 GSSP48637 474 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 GPR107Q5VW38 600 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 TCP10LQ8TDR4 215 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 PAWRQ96IZ0 340 aaKnown RBP13.42□□□□□ -0.26
VAMP4-201ENST00000236192 KIAA1586Q9HCI6 787 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 SMYD2Q9NRG4 433 aa13.42□□□□□ -0.26
VAMP4-201ENST00000236192 SUN2Q9UH99 717 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms