RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 TMEM109Q9BVC6 243 aa17.85■□□□□ 0.45
GAPDH-201ENST00000229239 DCLK3Q9C098 648 aa17.85■□□□□ 0.45
GAPDH-201ENST00000229239 MINDY3Q9H8M7 445 aa17.85■□□□□ 0.45
GAPDH-201ENST00000229239 CYP3A43Q9HB55 503 aa17.85■□□□□ 0.45
GAPDH-201ENST00000229239 PLXNB2O15031 1838 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 NDC80O14777 642 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 GJB1P08034 283 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 STAG3L1P0CL83 205 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 CXCL8P10145 99 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 GSCP56915 257 aaPredicted RBP17.84■□□□□ 0.45
GAPDH-201ENST00000229239 CDC42EP1Q00587 391 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 TMEM63BQ5T3F8 832 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 APBB1IPQ7Z5R6 666 aaPredicted RBP17.84■□□□□ 0.45
GAPDH-201ENST00000229239 SH2D3CQ8N5H7 860 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 C3orf20Q8ND61 904 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 AFG1LQ8WV93 481 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 C16orf70Q9BSU1 422 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 TMEM106CQ9BVX2 250 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 FAM107BQ9H098 131 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 STMN4Q9H169 189 aaPredicted RBP17.84■□□□□ 0.45
GAPDH-201ENST00000229239 WDR35Q9P2L0 1181 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 GRIN2DO15399 1336 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 A0A087WZ62 844 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 BRD2P25440 801 aaKnown RBP17.84■□□□□ 0.45
GAPDH-201ENST00000229239 IGBP1P78318 339 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 PPP1R15BQ5SWA1 713 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 MTHFD1LQ6UB35 978 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 TRMT10CQ7L0Y3 403 aaKnown RBP17.84■□□□□ 0.45
GAPDH-201ENST00000229239 ZNF410Q86VK4 478 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 ERICH1Q86X53 443 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 SLAIN1Q8ND83 568 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 FDXACB1Q9BRP7 624 aaPredicted RBP17.84■□□□□ 0.45
GAPDH-201ENST00000229239 OSBPL8Q9BZF1 889 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 PDZD7Q9H5P4 517 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 AKT3Q9Y243 479 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 MCM3APO60318 1980 aa17.84■□□□□ 0.45
GAPDH-201ENST00000229239 PLXNA1Q9UIW2 1896 aa17.83■□□□□ 0.45
GAPDH-201ENST00000229239 STAU1O95793 577 aaKnown RBP17.83■□□□□ 0.44
GAPDH-201ENST00000229239 IQCF3P0C7M6 154 aa17.83■□□□□ 0.44
GAPDH-201ENST00000229239 PTPN7P35236 360 aa17.83■□□□□ 0.44
GAPDH-201ENST00000229239 TAS2R40P59535 323 aa17.83■□□□□ 0.44
GAPDH-201ENST00000229239 KRT17Q04695 432 aa17.83■□□□□ 0.44
GAPDH-201ENST00000229239 GRB14Q14449 540 aa17.83■□□□□ 0.44
GAPDH-201ENST00000229239 DUSP28Q4G0W2 176 aa17.83■□□□□ 0.44
GAPDH-201ENST00000229239 C2CD6Q53TS8 623 aa17.83■□□□□ 0.44
GAPDH-201ENST00000229239 LLGL2Q6P1M3 1020 aa17.83■□□□□ 0.44
GAPDH-201ENST00000229239 PHLDB2Q86SQ0 1253 aa17.83■□□□□ 0.44
GAPDH-201ENST00000229239 CCDC50Q8IVM0 306 aa17.83■□□□□ 0.44
GAPDH-201ENST00000229239 CEP120Q8N960 986 aa17.83■□□□□ 0.44
GAPDH-201ENST00000229239 PXYLP1Q8TE99 480 aa17.83■□□□□ 0.44
GAPDH-201ENST00000229239 FOXP3Q9BZS1 431 aa17.83■□□□□ 0.44
GAPDH-201ENST00000229239 CNOT10Q9H9A5 744 aaKnown RBP17.83■□□□□ 0.44
GAPDH-201ENST00000229239 DDX56Q9NY93 547 aaKnown RBP17.83■□□□□ 0.44
GAPDH-201ENST00000229239 SIX4Q9UIU6 781 aa17.83■□□□□ 0.44
GAPDH-201ENST00000229239 GJD2Q9UKL4 321 aa17.83■□□□□ 0.44
GAPDH-201ENST00000229239 C2CD2Q9Y426 696 aa17.83■□□□□ 0.44
GAPDH-201ENST00000229239 LACTBL1A8MY62 500 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 H3BRB1 525 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 SNAI1O95863 264 aaPredicted RBP17.82■□□□□ 0.44
GAPDH-201ENST00000229239 WEE2P0C1S8 567 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 RALAP11233 206 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 OSTNP61366 133 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 BYSLQ13895 437 aaKnown RBP17.82■□□□□ 0.44
GAPDH-201ENST00000229239 SCARA3Q6AZY7 606 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 IQSEC1Q6DN90 963 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 DRICH1Q6PGQ1 229 aaPredicted RBP17.82■□□□□ 0.44
GAPDH-201ENST00000229239 DCUN1D2Q6PH85 259 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 SPATS2Q86XZ4 545 aaKnown RBP17.82■□□□□ 0.44
GAPDH-201ENST00000229239 CCDC89Q8N998 374 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 C1orf127Q8N9H9 656 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 C1orf54Q8WWF1 131 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 PGM2Q96G03 612 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 SNF8Q96H20 258 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 TUT1Q9H6E5 874 aaKnown RBP17.82■□□□□ 0.44
GAPDH-201ENST00000229239 MKI67P46013 3256 aaKnown RBP17.82■□□□□ 0.44
GAPDH-201ENST00000229239 NFICP08651 508 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 KRT19P08727 400 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 ELNP15502 786 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 MDH1P40925 334 aaKnown RBP17.82■□□□□ 0.44
GAPDH-201ENST00000229239 ADCYAP1R1P41586 468 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 KCNJ1P48048 391 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 ADCY2Q08462 1091 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 PCBP1Q15365 356 aaKnown RBP eCLIP17.82■□□□□ 0.445e-16■□□□□ 11.3
GAPDH-201ENST00000229239 KRT71Q3SY84 523 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 C6orf118Q5T5N4 469 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 GPR142Q7Z601 462 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 DPP9Q86TI2 863 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 WDTC1Q8N5D0 677 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 OR2W6PQ8NHA6 318 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 FNIP1Q8TF40 1166 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 TFAP2BQ92481 460 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 ROPN1BQ9BZX4 212 aaPredicted RBP17.82■□□□□ 0.44
GAPDH-201ENST00000229239 EPB41L4BQ9H329 900 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 ABHD16BQ9H3Z7 469 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 ROPN1Q9HAT0 212 aaPredicted RBP17.82■□□□□ 0.44
GAPDH-201ENST00000229239 ITGA11Q9UKX5 1188 aa17.82■□□□□ 0.44
GAPDH-201ENST00000229239 ANK1P16157 1881 aa17.81■□□□□ 0.44
GAPDH-201ENST00000229239 RRN3P2A6NIE6 340 aa17.81■□□□□ 0.44
GAPDH-201ENST00000229239 TJP3O95049 919 aa17.81■□□□□ 0.44
GAPDH-201ENST00000229239 ARF4P18085 180 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms