RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 GNL1P36915 607 aaPredicted RBP16.89■□□□□ 0.29
HDAC5-201ENST00000225983 OVGP1Q12889 678 aa16.89■□□□□ 0.29
HDAC5-201ENST00000225983 MAPRE2Q15555 327 aa16.89■□□□□ 0.29
HDAC5-201ENST00000225983 CAPRIN2Q6IMN6 1127 aaKnown RBP16.89■□□□□ 0.29
HDAC5-201ENST00000225983 PNMA5Q96PV4 448 aa16.89■□□□□ 0.29
HDAC5-201ENST00000225983 SPATA31A6Q5VVP1 1343 aa16.89■□□□□ 0.29
HDAC5-201ENST00000225983 PSTPIP1O43586 416 aa16.89■□□□□ 0.29
HDAC5-201ENST00000225983 RRM1P23921 792 aa16.89■□□□□ 0.29
HDAC5-201ENST00000225983 CDC42EP1Q00587 391 aa16.89■□□□□ 0.29
HDAC5-201ENST00000225983 NT5DC1Q5TFE4 455 aa16.89■□□□□ 0.29
HDAC5-201ENST00000225983 SCFD2Q8WU76 684 aa16.89■□□□□ 0.29
HDAC5-201ENST00000225983 ELMO3Q96BJ8 720 aa16.89■□□□□ 0.29
HDAC5-201ENST00000225983 GMCL1Q96IK5 515 aa16.89■□□□□ 0.29
HDAC5-201ENST00000225983 SERPINB12Q96P63 405 aa16.89■□□□□ 0.29
HDAC5-201ENST00000225983 NUDT12Q9BQG2 462 aa16.89■□□□□ 0.29
HDAC5-201ENST00000225983 PPCSQ9HAB8 311 aa16.89■□□□□ 0.29
HDAC5-201ENST00000225983 SLC40A1Q9NP59 571 aa16.89■□□□□ 0.29
HDAC5-201ENST00000225983 TRAF3IP3Q9Y228 551 aa16.89■□□□□ 0.29
HDAC5-201ENST00000225983 TLR2O60603 784 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 HNRNPCL1O60812 293 aaKnown RBP16.88■□□□□ 0.29
HDAC5-201ENST00000225983 TFRCP02786 760 aaKnown RBP16.88■□□□□ 0.29
HDAC5-201ENST00000225983 CHI3L2Q15782 390 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 COL23A1Q86Y22 540 aaPredicted RBP16.88■□□□□ 0.29
HDAC5-201ENST00000225983 ARMC2Q8NEN0 867 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 IPMKQ8NFU5 416 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 DNAJC6O75061 913 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 SLC25A27O95847 323 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 PDK1Q15118 436 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 TAF1CQ15572 869 aaPredicted RBP16.88■□□□□ 0.29
HDAC5-201ENST00000225983 LRRC23Q53EV4 343 aaPredicted RBP16.88■□□□□ 0.29
HDAC5-201ENST00000225983 TTC30BQ8N4P2 665 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 AGBL3Q8NEM8 1001 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 ACTRT1Q8TDG2 376 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 PRDM5Q9NQX1 630 aaPredicted RBP16.88■□□□□ 0.29
HDAC5-201ENST00000225983 KLK14Q9P0G3 267 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 B2RBV5 119 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 TRIM49D1C9J1S8 452 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 CAND2O75155 1236 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 POLBP06746 335 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 RIBC1Q8N443 379 aaPredicted RBP16.88■□□□□ 0.29
HDAC5-201ENST00000225983 GMCL1P1Q8NEA9 526 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 FBXO25Q8TCJ0 367 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 RPS6KA5O75582 802 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 SPAG6O75602 509 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 SV2CQ496J9 727 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 TMBIM4Q9HC24 238 aa16.88■□□□□ 0.29
HDAC5-201ENST00000225983 MAP3K20Q9NYL2 800 aaKnown RBP16.88■□□□□ 0.29
HDAC5-201ENST00000225983 SEC24DO94855 1032 aaPredicted RBP16.87■□□□□ 0.29
HDAC5-201ENST00000225983 MYL2P10916 166 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 PDAP1Q13442 181 aaKnown RBP16.87■□□□□ 0.29
HDAC5-201ENST00000225983 E2F7Q96AV8 911 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 YY1AP1Q9H869 796 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 TNS2Q63HR2 1409 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 AIM2O14862 343 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 SHMT1P34896 483 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 CLCN3P51790 818 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 CYTH1Q15438 398 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 MYCBPAPQ8TBZ2 947 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 DPP3Q9NY33 737 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 ANGPT2O15123 496 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 NCAM1P13591 858 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 ITGA4P13612 1032 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 SPRP35270 261 aaPredicted RBP16.87■□□□□ 0.29
HDAC5-201ENST00000225983 SOX11P35716 441 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 ACADSBP45954 432 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 RAP1GAPP47736 663 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 CEP19Q96LK0 163 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 CASS4Q9NQ75 786 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 MTO1Q9Y2Z2 717 aaKnown RBP16.87■□□□□ 0.29
HDAC5-201ENST00000225983 TMX2Q9Y320 296 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 ZSCAN5CA6NGD5 496 aaPredicted RBP16.87■□□□□ 0.29
HDAC5-201ENST00000225983 TADA2AO75478 443 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 CORO7P57737 925 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 DNAL1Q4LDG9 190 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 ZNF669Q96BR6 464 aaPredicted RBP16.87■□□□□ 0.29
HDAC5-201ENST00000225983 FAM111AQ96PZ2 611 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 DUSP9Q99956 384 aaKnown RBP16.87■□□□□ 0.29
HDAC5-201ENST00000225983 EHD4Q9H223 541 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 SNX5Q9Y5X3 404 aa16.87■□□□□ 0.29
HDAC5-201ENST00000225983 LOC100653049A0A140TA62 436 aa16.86■□□□□ 0.29
HDAC5-201ENST00000225983 KRT34O76011 436 aa16.86■□□□□ 0.29
HDAC5-201ENST00000225983 R3HDM1Q15032 1099 aaKnown RBP16.86■□□□□ 0.29
HDAC5-201ENST00000225983 RFWD2Q8NHY2 731 aa16.86■□□□□ 0.29
HDAC5-201ENST00000225983 VWDEQ8N2E2 1590 aa16.86■□□□□ 0.29
HDAC5-201ENST00000225983 TMEM247A6NEH6 219 aa16.86■□□□□ 0.29
HDAC5-201ENST00000225983 OGTO15294 1046 aa16.86■□□□□ 0.29
HDAC5-201ENST00000225983 UGP2Q16851 508 aa16.86■□□□□ 0.29
HDAC5-201ENST00000225983 PRPF39Q86UA1 669 aaKnown RBP16.86■□□□□ 0.29
HDAC5-201ENST00000225983 IQCA1LA6NCM1 817 aa16.86■□□□□ 0.29
HDAC5-201ENST00000225983 IL1R1P14778 569 aa16.86■□□□□ 0.29
HDAC5-201ENST00000225983 TCN1P20061 433 aaPredicted RBP16.86■□□□□ 0.29
HDAC5-201ENST00000225983 TARSP26639 723 aaKnown RBP16.86■□□□□ 0.29
HDAC5-201ENST00000225983 NNMTP40261 264 aa16.86■□□□□ 0.29
HDAC5-201ENST00000225983 TBX2Q13207 712 aaPredicted RBP16.86■□□□□ 0.29
HDAC5-201ENST00000225983 NUP93Q8N1F7 819 aa16.86■□□□□ 0.29
HDAC5-201ENST00000225983 PPLO60437 1756 aa16.86■□□□□ 0.29
HDAC5-201ENST00000225983 SMIM22K7EJ46 135 aa16.86■□□□□ 0.29
HDAC5-201ENST00000225983 DGKIO75912 1065 aa16.86■□□□□ 0.29
HDAC5-201ENST00000225983 SERPINB4P48594 390 aa16.86■□□□□ 0.29
HDAC5-201ENST00000225983 EFHC1Q5JVL4 640 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms