RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 HMX1Q9NP08 348 aaPredicted RBP15.79■□□□□ 0.12
CCDC47-201ENST00000225726 ARFGAP3Q9NP61 516 aa15.79■□□□□ 0.12
CCDC47-201ENST00000225726 PROSCO94903 275 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 TRIM71Q2Q1W2 868 aaKnown RBP15.78■□□□□ 0.12
CCDC47-201ENST00000225726 FBXO47Q5MNV8 452 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 FEZF2Q8TBJ5 459 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 ZNF296Q8WUU4 475 aaPredicted RBP15.78■□□□□ 0.12
CCDC47-201ENST00000225726 STRIP2Q9ULQ0 834 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 NOD1Q9Y239 953 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 CCDC188H7C350 402 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 MICAL2O94851 1124 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 ITGA4P13612 1032 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 TRIM7Q9C029 511 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 RNF19AQ9NV58 838 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 TCRBV5S1A1TA0A578 114 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 CAND2O75155 1236 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 MARCKSL1P49006 195 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 TAP1Q03518 808 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 STILQ15468 1287 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 LHX8Q68G74 356 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 CPNE8Q86YQ8 564 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 GLT1D1Q96MS3 346 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 MRPL45Q9BRJ2 306 aaKnown RBP15.78■□□□□ 0.12
CCDC47-201ENST00000225726 TRMT13Q9NUP7 481 aaKnown RBP15.78■□□□□ 0.12
CCDC47-201ENST00000225726 GDAP2Q9NXN4 497 aa15.78■□□□□ 0.12
CCDC47-201ENST00000225726 O00370 1275 aa15.77■□□□□ 0.12
CCDC47-201ENST00000225726 KRIT1O00522 736 aa15.77■□□□□ 0.12
CCDC47-201ENST00000225726 ZRANB2O95218 330 aaKnown RBP eCLIP15.77■□□□□ 0.12
CCDC47-201ENST00000225726 MAN1A1P33908 653 aa15.77■□□□□ 0.12
CCDC47-201ENST00000225726 SOX4Q06945 474 aaPredicted RBP15.77■□□□□ 0.12
CCDC47-201ENST00000225726 PAK2Q13177 524 aa15.77■□□□□ 0.12
CCDC47-201ENST00000225726 SV2CQ496J9 727 aa15.77■□□□□ 0.12
CCDC47-201ENST00000225726 DNAJC24Q6P3W2 148 aa15.77■□□□□ 0.12
CCDC47-201ENST00000225726 PPP1R10Q96QC0 940 aaKnown RBP15.77■□□□□ 0.12
CCDC47-201ENST00000225726 AGO3Q9H9G7 860 aaKnown RBP15.77■□□□□ 0.12
CCDC47-201ENST00000225726 PTGESO14684 152 aa15.77■□□□□ 0.12
CCDC47-201ENST00000225726 FGGP02679 453 aa15.77■□□□□ 0.12
CCDC47-201ENST00000225726 LRPAP1P30533 357 aa15.77■□□□□ 0.12
CCDC47-201ENST00000225726 GRK4P32298 578 aa15.77■□□□□ 0.12
CCDC47-201ENST00000225726 TAF6P49848 677 aa15.77■□□□□ 0.12
CCDC47-201ENST00000225726 SEL1L2Q5TEA6 688 aa15.77■□□□□ 0.12
CCDC47-201ENST00000225726 UNC93AQ86WB7 457 aa15.77■□□□□ 0.12
CCDC47-201ENST00000225726 KRT12Q99456 494 aa15.77■□□□□ 0.12
CCDC47-201ENST00000225726 PADI3Q9ULW8 664 aa15.77■□□□□ 0.12
CCDC47-201ENST00000225726 SEC31AO94979 1220 aaKnown RBP15.77■□□□□ 0.11
CCDC47-201ENST00000225726 GSCP56915 257 aaPredicted RBP15.77■□□□□ 0.11
CCDC47-201ENST00000225726 RWDD2BP57060 319 aa15.77■□□□□ 0.11
CCDC47-201ENST00000225726 ZNF211Q13398 564 aaPredicted RBP15.77■□□□□ 0.11
CCDC47-201ENST00000225726 LONRF2Q1L5Z9 754 aa15.77■□□□□ 0.11
CCDC47-201ENST00000225726 MRPL10Q7Z7H8 261 aaKnown RBP15.77■□□□□ 0.11
CCDC47-201ENST00000225726 SLC38A7Q9NVC3 462 aa15.77■□□□□ 0.11
CCDC47-201ENST00000225726 IP6K2Q9UHH9 426 aa15.77■□□□□ 0.11
CCDC47-201ENST00000225726 CYTH4Q9UIA0 394 aa15.77■□□□□ 0.11
CCDC47-201ENST00000225726 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.77■□□□□ 0.11
CCDC47-201ENST00000225726 SQORQ9Y6N5 450 aa15.77■□□□□ 0.11
CCDC47-201ENST00000225726 KPNA7A9QM74 516 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 M0QYV0 167 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 CD52P31358 61 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 RAB27AP51159 221 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 LPIN1Q14693 890 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 PTPN20Q4JDL3 420 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 LCLAT1Q6UWP7 414 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 C3orf20Q8ND61 904 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.76■□□□□ 0.11
CCDC47-201ENST00000225726 TRAIPQ9BWF2 469 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 AP1M1Q9BXS5 423 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 STIM2Q9P246 746 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 GIT1Q9Y2X7 761 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 TMEM191CA6NGB0 347 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 ATP8B1O43520 1251 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 GHRP10912 638 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 TNNT3P45378 269 aaPredicted RBP15.76■□□□□ 0.11
CCDC47-201ENST00000225726 DSC3Q14574 896 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 SOWAHAQ2M3V2 549 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 PPP1R15BQ5SWA1 713 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 LIMS2Q7Z4I7 341 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 SLC43A3Q8NBI5 491 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 GOLGA2P5Q9HBQ8 144 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 WDR35Q9P2L0 1181 aa15.76■□□□□ 0.11
CCDC47-201ENST00000225726 HSPA6P17066 643 aa15.75■□□□□ 0.11
CCDC47-201ENST00000225726 MAP9Q49MG5 647 aa15.75■□□□□ 0.11
CCDC47-201ENST00000225726 KLHL7Q8IXQ5 586 aa15.75■□□□□ 0.11
CCDC47-201ENST00000225726 HDAC7Q8WUI4 952 aa15.75■□□□□ 0.11
CCDC47-201ENST00000225726 DMGDHQ9UI17 866 aaKnown RBP15.75■□□□□ 0.11
CCDC47-201ENST00000225726 A0A1W2PQ45 241 aaPredicted RBP15.75■□□□□ 0.11
CCDC47-201ENST00000225726 A0A1W2PQY0 241 aa15.75■□□□□ 0.11
CCDC47-201ENST00000225726 SPTLC1O15269 473 aa15.75■□□□□ 0.11
CCDC47-201ENST00000225726 GPD2P43304 727 aa15.75■□□□□ 0.11
CCDC47-201ENST00000225726 GABRB2P47870 512 aa15.75■□□□□ 0.11
CCDC47-201ENST00000225726 BEND6Q5SZJ8 279 aaPredicted RBP15.75■□□□□ 0.11
CCDC47-201ENST00000225726 CYP4A22Q5TCH4 519 aa15.75■□□□□ 0.11
CCDC47-201ENST00000225726 ZFP42Q96MM3 310 aa15.75■□□□□ 0.11
CCDC47-201ENST00000225726 PLVAPQ9BX97 442 aa15.75■□□□□ 0.11
CCDC47-201ENST00000225726 OSBPL7Q9BZF2 842 aa15.75■□□□□ 0.11
CCDC47-201ENST00000225726 DNAI2Q9GZS0 605 aa15.75■□□□□ 0.11
CCDC47-201ENST00000225726 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.75■□□□□ 0.11
CCDC47-201ENST00000225726 PSTPIP1O43586 416 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 ZNF623O75123 536 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 GJB6O95452 261 aa15.74■□□□□ 0.11
CCDC47-201ENST00000225726 YY1P25490 414 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms