RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 CYP4F11Q9HBI6 524 aa15.42■□□□□ 0.06
SUPT4H1-201ENST00000225504 AFF4Q9UHB7 1163 aaKnown RBP15.42■□□□□ 0.06
SUPT4H1-201ENST00000225504 GTF3C4Q9UKN8 822 aa15.42■□□□□ 0.06
SUPT4H1-201ENST00000225504 NFE2L3Q9Y4A8 694 aa15.42■□□□□ 0.06
SUPT4H1-201ENST00000225504 USP15Q9Y4E8 981 aaPredicted RBP15.42■□□□□ 0.06
SUPT4H1-201ENST00000225504 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.42■□□□□ 0.06
SUPT4H1-201ENST00000225504 UNC80Q8N2C7 3258 aa15.42■□□□□ 0.06
SUPT4H1-201ENST00000225504 TCF20Q9UGU0 1960 aaKnown RBP15.41■□□□□ 0.06
SUPT4H1-201ENST00000225504 MYBPHLA2RUH7 354 aa15.41■□□□□ 0.06
SUPT4H1-201ENST00000225504 TACC1O75410 805 aa15.41■□□□□ 0.06
SUPT4H1-201ENST00000225504 C8AP07357 584 aa15.41■□□□□ 0.06
SUPT4H1-201ENST00000225504 IL9P15248 144 aa15.41■□□□□ 0.06
SUPT4H1-201ENST00000225504 ASPAP45381 313 aa15.41■□□□□ 0.06
SUPT4H1-201ENST00000225504 LHX1P48742 406 aa15.41■□□□□ 0.06
SUPT4H1-201ENST00000225504 DUSP4Q13115 394 aa15.41■□□□□ 0.06
SUPT4H1-201ENST00000225504 SKOR2Q2VWA4 1001 aaPredicted RBP15.41■□□□□ 0.06
SUPT4H1-201ENST00000225504 ANO6Q4KMQ2 910 aa15.41■□□□□ 0.06
SUPT4H1-201ENST00000225504 TCEAL8Q8IYN2 117 aa15.41■□□□□ 0.06
SUPT4H1-201ENST00000225504 OR6B3Q8NGW1 331 aa15.41■□□□□ 0.06
SUPT4H1-201ENST00000225504 LMO3Q8TAP4 145 aa15.41■□□□□ 0.06
SUPT4H1-201ENST00000225504 ACBD6Q9BR61 282 aa15.41■□□□□ 0.06
SUPT4H1-201ENST00000225504 DPEP3Q9H4B8 488 aa15.41■□□□□ 0.06
SUPT4H1-201ENST00000225504 SFXN1Q9H9B4 322 aa15.41■□□□□ 0.06
SUPT4H1-201ENST00000225504 FANCLQ9NW38 375 aa15.41■□□□□ 0.06
SUPT4H1-201ENST00000225504 MTMR11A4FU01 709 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 SPDYE4A6NLX3 237 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 SOAT2O75908 522 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 FAM163BP0C2L3 166 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 PSMC1P62191 440 aaKnown RBP15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 NOP14P78316 857 aaKnown RBP15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 MYL7Q01449 175 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 LRMPQ12912 555 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 NCAPHQ15003 741 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 AAK1Q2M2I8 961 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 GPR149Q86SP6 731 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 SUSD6Q92537 303 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 BCO2Q9BYV7 579 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 SNX25Q9H3E2 840 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 CRTAC1Q9NQ79 661 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 DOCK6Q96HP0 2047 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 C5orf42Q9H799 3197 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 PRRG1O14668 218 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 PMM2O15305 246 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 CCL16O15467 120 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 LETM1O95202 739 aaPredicted RBP15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 AFPP02771 609 aaKnown RBP15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 ELF1P32519 619 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 MTIF2P46199 727 aaKnown RBP15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 ORC1Q13415 861 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 SMAD4Q13485 552 aaKnown RBP15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 ZSCAN23Q3MJ62 389 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 INTS6LQ5JSJ4 861 aaKnown RBP15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 PPM1LQ5SGD2 360 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 LIN9Q5TKA1 542 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 FAM171BQ6P995 826 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 CMASQ8NFW8 434 aaPredicted RBP15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 SPATA18Q8TC71 538 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 ARID3AQ99856 593 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 SYT15Q9BQS2 421 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 PRKD2Q9BZL6 878 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 HSD3B7Q9H2F3 369 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 HMGXB4Q9UGU5 601 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 DPP7Q9UHL4 492 aa15.4■□□□□ 0.06
SUPT4H1-201ENST00000225504 SPTBN5Q9NRC6 3674 aaKnown RBP15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 A8MXQ7 604 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 KCNJ18B7U540 433 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 PAPLNO95428 1278 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 NTHL1P78549 312 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 TSPY1Q01534 308 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 ITIH3Q06033 890 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 KCNJ12Q14500 433 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 SMAD2Q15796 467 aaKnown RBP15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 UVSSAQ2YD98 709 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 TCP11X2Q5H9J9 407 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 WDR44Q5JSH3 913 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 MIIPQ5JXC2 388 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 CDKAL1Q5VV42 579 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 CES5AQ6NT32 575 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 DCP1BQ8IZD4 617 aaKnown RBP15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 EHBP1Q8NDI1 1231 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 SMG7Q92540 1137 aaKnown RBP15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 CRACR2AQ9BSW2 395 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 RHOBTB2Q9BYZ6 727 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 IMPG2Q9BZV3 1241 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 NIF3L1Q9GZT8 377 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 HCFC1R1Q9NWW0 138 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 ZDHHC7Q9NXF8 308 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 ABI2Q9NYB9 513 aaPredicted RBP15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 CDH9Q9ULB4 789 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 INSL5Q9Y5Q6 135 aa15.39■□□□□ 0.05
SUPT4H1-201ENST00000225504 C2orf16Q68DN1 1984 aa15.38■□□□□ 0.05
SUPT4H1-201ENST00000225504 P4HA1P13674 534 aa15.38■□□□□ 0.05
SUPT4H1-201ENST00000225504 PTPN1P18031 435 aaKnown RBP15.38■□□□□ 0.05
SUPT4H1-201ENST00000225504 CD58P19256 250 aa15.38■□□□□ 0.05
SUPT4H1-201ENST00000225504 PCSK1P29120 753 aa15.38■□□□□ 0.05
SUPT4H1-201ENST00000225504 NDST1P52848 882 aa15.38■□□□□ 0.05
SUPT4H1-201ENST00000225504 APBA1Q02410 837 aa15.38■□□□□ 0.05
SUPT4H1-201ENST00000225504 CBX2Q14781 532 aaPredicted RBP15.38■□□□□ 0.05
SUPT4H1-201ENST00000225504 ATAT1Q5SQI0 421 aa15.38■□□□□ 0.05
SUPT4H1-201ENST00000225504 CCDC149Q6ZUS6 474 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms