RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 CCDC142Q17RM4 750 aa20.78■□□□□ 0.92
SNAPC2-201ENST00000221573 PDE12Q6L8Q7 609 aaKnown RBP20.78■□□□□ 0.92
SNAPC2-201ENST00000221573 THEM5Q8N1Q8 247 aa20.78■□□□□ 0.92
SNAPC2-201ENST00000221573 NEK11Q8NG66 645 aa20.78■□□□□ 0.92
SNAPC2-201ENST00000221573 WHAMMQ8TF30 809 aa20.78■□□□□ 0.92
SNAPC2-201ENST00000221573 TWNKQ96RR1 684 aa20.78■□□□□ 0.92
SNAPC2-201ENST00000221573 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.78■□□□□ 0.92
SNAPC2-201ENST00000221573 BARX2Q9UMQ3 279 aaPredicted RBP20.78■□□□□ 0.92
SNAPC2-201ENST00000221573 TPM3P06753 285 aa20.77■□□□□ 0.92
SNAPC2-201ENST00000221573 CDR1P51861 262 aa20.77■□□□□ 0.92
SNAPC2-201ENST00000221573 MFAP3P55082 362 aa20.77■□□□□ 0.92
SNAPC2-201ENST00000221573 ARPP19P56211 112 aa20.77■□□□□ 0.92
SNAPC2-201ENST00000221573 PSMC1P62191 440 aaKnown RBP20.77■□□□□ 0.92
SNAPC2-201ENST00000221573 ZNF394Q53GI3 561 aa20.77■□□□□ 0.92
SNAPC2-201ENST00000221573 KLHL5Q96PQ7 755 aa20.77■□□□□ 0.92
SNAPC2-201ENST00000221573 NAA15Q9BXJ9 866 aaKnown RBP20.77■□□□□ 0.92
SNAPC2-201ENST00000221573 FNIP2Q9P278 1114 aa20.77■□□□□ 0.92
SNAPC2-201ENST00000221573 PTPRDP23468 1912 aa20.77■□□□□ 0.91
SNAPC2-201ENST00000221573 MTCL1Q9Y4B5 1905 aaKnown RBP20.76■□□□□ 0.91
SNAPC2-201ENST00000221573 OR6C75A6NL08 312 aa20.76■□□□□ 0.91
SNAPC2-201ENST00000221573 ATP2C2O75185 946 aa20.76■□□□□ 0.91
SNAPC2-201ENST00000221573 OR1D2P34982 312 aa20.76■□□□□ 0.91
SNAPC2-201ENST00000221573 POLR2FP61218 127 aaKnown RBP20.76■□□□□ 0.91
SNAPC2-201ENST00000221573 RAPGEF1Q13905 1077 aa20.76■□□□□ 0.91
SNAPC2-201ENST00000221573 SLC8B1Q6J4K2 584 aa20.76■□□□□ 0.91
SNAPC2-201ENST00000221573 DEFB123Q8N688 67 aa20.76■□□□□ 0.91
SNAPC2-201ENST00000221573 LPIN3Q9BQK8 851 aa20.76■□□□□ 0.91
SNAPC2-201ENST00000221573 SYT15Q9BQS2 421 aa20.76■□□□□ 0.91
SNAPC2-201ENST00000221573 ACBD6Q9BR61 282 aa20.76■□□□□ 0.91
SNAPC2-201ENST00000221573 ELOVL4Q9GZR5 314 aa20.76■□□□□ 0.91
SNAPC2-201ENST00000221573 NLRC4Q9NPP4 1024 aa20.76■□□□□ 0.91
SNAPC2-201ENST00000221573 MTCH2Q9Y6C9 303 aa20.76■□□□□ 0.91
SNAPC2-201ENST00000221573 PER2O15055 1255 aa20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 PNMA6AP0CW24 399 aaPredicted RBP20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 CPB1P15086 417 aa20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 PCSK1P29120 753 aa20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 NDUFV1P49821 464 aa20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 YWHAEP62258 255 aaKnown RBP20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 ROR1Q01973 937 aa20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 CREMQ03060 361 aa20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 INTS6LQ5JSJ4 861 aaKnown RBP20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 ENOSF1Q7L5Y1 443 aa20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 RBM23Q86U06 439 aaKnown RBP20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 LRRTM3Q86VH5 581 aa20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 MYLIPQ8WY64 445 aa20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 FAM81BQ96LP2 452 aa20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 EMILIN2Q9BXX0 1053 aa20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 GPR88Q9GZN0 384 aa20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 ZCWPW1Q9H0M4 648 aa20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 CDH9Q9ULB4 789 aa20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 PCDHB4Q9Y5E5 795 aa20.75■□□□□ 0.91
SNAPC2-201ENST00000221573 FSD2A1L4K1 749 aa20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 WDR27A2RRH5 827 aa20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 TRIM21P19474 475 aaKnown RBP20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 RFX1P22670 979 aa20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 IGFBP4P22692 258 aa20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 ZNF75DP51815 510 aa20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 TMEM270Q6UE05 265 aa20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 ACOT1Q86TX2 421 aa20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 UNC93AQ86WB7 457 aa20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 SHC3Q92529 594 aa20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 GUCD1Q96NT3 240 aa20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 GAS2L1Q99501 681 aaPredicted RBP20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 PKMYT1Q99640 499 aa20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 NT5C1AQ9BXI3 368 aa20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 FAM124BQ9H5Z6 455 aaPredicted RBP20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 CRTAC1Q9NQ79 661 aa20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 TMLHEQ9NVH6 421 aa20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 LMCD1Q9NZU5 365 aa20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 MYH10P35580 1976 aa20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 REV3LO60673 3130 aa20.74■□□□□ 0.91
SNAPC2-201ENST00000221573 MYBPHLA2RUH7 354 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 GOLGA6L3A6NEY3 463 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 RNF225M0QZC1 329 aaPredicted RBP20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 ADH1AP07327 375 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 KLRC2P26717 231 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 RAD23BP54727 409 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 TSPY1Q01534 308 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 DRAP1Q14919 205 aaPredicted RBP20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 SLC39A12Q504Y0 691 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 PALB2Q86YC2 1186 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 VSTM4Q8IW00 320 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 TTC39CQ8N584 583 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 SLC4A11Q8NBS3 891 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 B3GALNT2Q8NCR0 500 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 JAKMIP2Q96AA8 810 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 CDX2Q99626 313 aaPredicted RBP20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 OXCT2Q9BYC2 517 aaPredicted RBP20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 TTYH3Q9C0H2 523 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 NSUN3Q9H649 340 aaKnown RBP20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 GTF3C4Q9UKN8 822 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 CLASP2O75122 1294 aaKnown RBP20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 KRT5P13647 590 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 PTPN1P18031 435 aaKnown RBP20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 POU3F3P20264 500 aaPredicted RBP20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 GTF2F1P35269 517 aaKnown RBP eCLIP20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 NRIP1P48552 1158 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 RAB33AQ14088 237 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 TCEAL5Q5H9L2 206 aa20.73■□□□□ 0.91
SNAPC2-201ENST00000221573 MDH1BQ5I0G3 518 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms