RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 RGS17Q9UGC6 210 aaPredicted RBP15.44■□□□□ 0.06
CNOT3-201ENST00000221232 USP15Q9Y4E8 981 aaPredicted RBP15.44■□□□□ 0.06
CNOT3-201ENST00000221232 PSMA2P25787 234 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 FOXN2P32314 431 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 PKN2Q16513 984 aaKnown RBP15.43■□□□□ 0.06
CNOT3-201ENST00000221232 WDR72Q3MJ13 1102 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 EEF1DP3Q658K8 133 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.43■□□□□ 0.06
CNOT3-201ENST00000221232 FAM228AQ86W67 206 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 BRSK2Q8IWQ3 736 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 MRPL4Q9BYD3 311 aaKnown RBP15.43■□□□□ 0.06
CNOT3-201ENST00000221232 NIFKQ9BYG3 293 aaKnown RBP15.43■□□□□ 0.06
CNOT3-201ENST00000221232 SYNCQ9H7C4 482 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.43■□□□□ 0.06
CNOT3-201ENST00000221232 NOP56O00567 594 aaKnown RBP15.43■□□□□ 0.06
CNOT3-201ENST00000221232 TOM1L1O75674 476 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 ATP5DP30049 168 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 CLCN3P51790 818 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 KCNJ2P63252 427 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 CAV1Q03135 178 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 PDIA2Q13087 525 aaKnown RBP15.43■□□□□ 0.06
CNOT3-201ENST00000221232 MAPK6Q16659 721 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 SEPT1Q8WYJ6 367 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 SGSM3Q96HU1 749 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 VCPIP1Q96JH7 1222 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 ACO2Q99798 780 aaKnown RBP15.43■□□□□ 0.06
CNOT3-201ENST00000221232 C12orf65Q9H3J6 166 aaKnown RBP15.43■□□□□ 0.06
CNOT3-201ENST00000221232 CYTH4Q9UIA0 394 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 STK38LQ9Y2H1 464 aa15.43■□□□□ 0.06
CNOT3-201ENST00000221232 CDH16O75309 829 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 IL1R2P27930 398 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 BAG6P46379 1132 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 GDF10P55107 478 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 DNAJC3Q13217 504 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 VGLL4Q14135 290 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 TARBP2Q15633 366 aaKnown RBP15.42■□□□□ 0.06
CNOT3-201ENST00000221232 SNCBQ16143 134 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 KIAA0319LQ8IZA0 1049 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 LRRN4Q8WUT4 740 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 CKAP2Q8WWK9 683 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 C12orf42Q96LP6 360 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 NIF3L1Q9GZT8 377 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 A0A1W2PPM1 405 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 WDR91A4D1P6 747 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 STAM2O75886 525 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 PIGRP01833 764 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 CXCL8P10145 99 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 RDXP35241 583 aaKnown RBP15.42■□□□□ 0.06
CNOT3-201ENST00000221232 ITIH4Q14624 930 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 EFTUD2Q15029 972 aaKnown RBP eCLIP15.42■□□□□ 0.061e-6■■■■■ 27.5
CNOT3-201ENST00000221232 PLCB4Q15147 1175 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 HSPH1Q92598 858 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 RBM41Q96IZ5 413 aaKnown RBP15.42■□□□□ 0.06
CNOT3-201ENST00000221232 RMDN2Q96LZ7 410 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 KLF6Q99612 283 aaPredicted RBP15.42■□□□□ 0.06
CNOT3-201ENST00000221232 PSME4Q14997 1843 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 GOLGA8RI6L899 631 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 DNALI1O14645 258 aaPredicted RBP15.42■□□□□ 0.06
CNOT3-201ENST00000221232 CST8O60676 142 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 MAFO75444 373 aaPredicted RBP15.42■□□□□ 0.06
CNOT3-201ENST00000221232 USP2O75604 605 aaPredicted RBP15.42■□□□□ 0.06
CNOT3-201ENST00000221232 SSTR1P30872 391 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 PSMC1P62191 440 aaKnown RBP15.42■□□□□ 0.06
CNOT3-201ENST00000221232 ELF3P78545 371 aaPredicted RBP15.42■□□□□ 0.06
CNOT3-201ENST00000221232 SGSM1Q2NKQ1 1148 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 PTPN20Q4JDL3 420 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 MOB2Q70IA6 237 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 SPATA21Q7Z572 469 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 ZCCHC9Q8N567 271 aaKnown RBP15.42■□□□□ 0.06
CNOT3-201ENST00000221232 GPATCH11Q8N954 259 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 ECT2Q9H8V3 914 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 SLCO1B3Q9NPD5 702 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 HMGXB4Q9UGU5 601 aa15.42■□□□□ 0.06
CNOT3-201ENST00000221232 MYH9P35579 1960 aaKnown RBP15.41■□□□□ 0.06
CNOT3-201ENST00000221232 COL11A1P12107 1806 aaPredicted RBP15.41■□□□□ 0.06
CNOT3-201ENST00000221232 hCG_1818297A0A087WSY0 165 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 SUN1O94901 812 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 MAP3K6O95382 1288 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 CALB1P05937 261 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 KRT3P12035 628 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 ZNF132P52740 706 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 WDR4P57081 412 aaKnown RBP15.41■□□□□ 0.06
CNOT3-201ENST00000221232 RAB6CQ53S08 254 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 TFDP3Q5H9I0 405 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 GJC2Q5T442 439 aaPredicted RBP15.41■□□□□ 0.06
CNOT3-201ENST00000221232 ANKRD22Q5VYY1 191 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 FAM160B1Q5W0V3 765 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 WDR49Q8IV35 697 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 ALLCQ8N6M5 410 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 UBA3Q8TBC4 463 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 RAB6CQ9H0N0 254 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 CCDC134Q9H6E4 229 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 TMEM134Q9H6X4 195 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 MINDY3Q9H8M7 445 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 LOC102724159A0A0B4J2E5 919 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 ATP2A1O14983 1001 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 OGTO15294 1046 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 FAM189A1O60320 539 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 GRAP2O75791 330 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 GCAP28676 217 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms