RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 CRELD2Q6UXH1 353 aaPredicted RBP17.04■□□□□ 0.32
NME3-201ENST00000219302 TMEM150AQ86TG1 271 aa17.04■□□□□ 0.32
NME3-201ENST00000219302 NETO1Q8TDF5 533 aa17.04■□□□□ 0.32
NME3-201ENST00000219302 C2orf15Q8WU43 125 aaKnown RBP17.04■□□□□ 0.32
NME3-201ENST00000219302 SEPT5Q99719 369 aaPredicted RBP17.04■□□□□ 0.32
NME3-201ENST00000219302 FAM83CQ9BQN1 747 aa17.04■□□□□ 0.32
NME3-201ENST00000219302 SMG9Q9H0W8 520 aaKnown RBP17.04■□□□□ 0.32
NME3-201ENST00000219302 GKN1Q9NS71 199 aa17.04■□□□□ 0.32
NME3-201ENST00000219302 NUP210Q8TEM1 1887 aaPredicted RBP17.03■□□□□ 0.32
NME3-201ENST00000219302 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.03■□□□□ 0.32
NME3-201ENST00000219302 H3BQV1 296 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 F11P03951 625 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 ADRB1P08588 477 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 HMGA1P17096 107 aaKnown RBP17.03■□□□□ 0.32
NME3-201ENST00000219302 ABCD1P33897 745 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 VEPH1Q14D04 833 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 KARSQ15046 597 aaKnown RBP17.03■□□□□ 0.32
NME3-201ENST00000219302 RABEP1Q15276 862 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 ITPRIPL2Q3MIP1 535 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 WSCD1Q658N2 575 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 ADALQ6DHV7 355 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 SLFN12LQ6IEE8 588 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 PRR23CQ6ZRP0 262 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 WDR5BQ86VZ2 330 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 FAM200AQ8TCP9 573 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 SPPL2BQ8TCT7 592 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 GIPC2Q8TF65 315 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 CHFRQ96EP1 664 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 PYM1Q9BRP8 204 aaKnown RBP17.03■□□□□ 0.32
NME3-201ENST00000219302 IKZF4Q9H2S9 585 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 DPP3Q9NY33 737 aa17.03■□□□□ 0.32
NME3-201ENST00000219302 AGO2Q9UKV8 859 aaKnown RBP17.03■□□□□ 0.32
NME3-201ENST00000219302 CNOT1A5YKK6 2376 aaKnown RBP17.03■□□□□ 0.32
NME3-201ENST00000219302 EXTL3O43909 919 aa17.02■□□□□ 0.32
NME3-201ENST00000219302 GDF9O60383 454 aa17.02■□□□□ 0.32
NME3-201ENST00000219302 CD2BP2O95400 341 aaKnown RBP17.02■□□□□ 0.32
NME3-201ENST00000219302 ADSSP30520 456 aa17.02■□□□□ 0.32
NME3-201ENST00000219302 DDIT3P35638 169 aa17.02■□□□□ 0.32
NME3-201ENST00000219302 LONP1P36776 959 aaKnown RBP17.02■□□□□ 0.32
NME3-201ENST00000219302 MCM2P49736 904 aa17.02■□□□□ 0.32
NME3-201ENST00000219302 TAF6P49848 677 aa17.02■□□□□ 0.32
NME3-201ENST00000219302 PKN3Q6P5Z2 889 aa17.02■□□□□ 0.32
NME3-201ENST00000219302 ZNF720Q7Z2F6 126 aa17.02■□□□□ 0.32
NME3-201ENST00000219302 METTL23Q86XA0 190 aa17.02■□□□□ 0.32
NME3-201ENST00000219302 EFCAB13Q8IY85 973 aa17.02■□□□□ 0.32
NME3-201ENST00000219302 CMTM8Q8IZV2 173 aa17.02■□□□□ 0.32
NME3-201ENST00000219302 THEM5Q8N1Q8 247 aa17.02■□□□□ 0.32
NME3-201ENST00000219302 FAM160A2Q8N612 972 aaPredicted RBP17.02■□□□□ 0.32
NME3-201ENST00000219302 STRA6Q9BX79 667 aa17.02■□□□□ 0.32
NME3-201ENST00000219302 ZHX3Q9H4I2 956 aa17.02■□□□□ 0.32
NME3-201ENST00000219302 HPS4Q9NQG7 708 aa17.02■□□□□ 0.32
NME3-201ENST00000219302 TMLHEQ9NVH6 421 aa17.02■□□□□ 0.32
NME3-201ENST00000219302 THG1LQ9NWX6 298 aaKnown RBP17.02■□□□□ 0.32
NME3-201ENST00000219302 RALGAPA1Q6GYQ0 2036 aa17.02■□□□□ 0.32
NME3-201ENST00000219302 TSC2P49815 1807 aa17.01■□□□□ 0.31
NME3-201ENST00000219302 OTOL1A6NHN0 477 aaPredicted RBP17.01■□□□□ 0.31
NME3-201ENST00000219302 KPNA7A9QM74 516 aa17.01■□□□□ 0.31
NME3-201ENST00000219302 KRT18P05783 430 aaKnown RBP17.01■□□□□ 0.31
NME3-201ENST00000219302 NLRP12P59046 1061 aa17.01■□□□□ 0.31
NME3-201ENST00000219302 TMEM196Q5HYL7 178 aa17.01■□□□□ 0.31
NME3-201ENST00000219302 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.01■□□□□ 0.31
NME3-201ENST00000219302 USP13Q92995 863 aaPredicted RBP17.01■□□□□ 0.31
NME3-201ENST00000219302 ZMYM5Q9UJ78 669 aa17.01■□□□□ 0.31
NME3-201ENST00000219302 CCL26Q9Y258 94 aa17.01■□□□□ 0.31
NME3-201ENST00000219302 KMT2BQ9UMN6 2715 aaPredicted RBP17.01■□□□□ 0.31
NME3-201ENST00000219302 CCDC163A0A0D9SF12 145 aa17■□□□□ 0.31
NME3-201ENST00000219302 SOBPA7XYQ1 873 aa17■□□□□ 0.31
NME3-201ENST00000219302 TRDMT1O14717 391 aaKnown RBP17■□□□□ 0.31
NME3-201ENST00000219302 TBCAO75347 108 aaKnown RBP17■□□□□ 0.31
NME3-201ENST00000219302 PPP1R37O75864 691 aa17■□□□□ 0.31
NME3-201ENST00000219302 RUNX3Q13761 415 aa17■□□□□ 0.31
NME3-201ENST00000219302 PTPAQ15257 358 aa17■□□□□ 0.31
NME3-201ENST00000219302 PPM1JQ5JR12 505 aa17■□□□□ 0.31
NME3-201ENST00000219302 FSTL4Q6MZW2 842 aa17■□□□□ 0.31
NME3-201ENST00000219302 DCP1BQ8IZD4 617 aaKnown RBP17■□□□□ 0.31
NME3-201ENST00000219302 RIN3Q8TB24 985 aa17■□□□□ 0.31
NME3-201ENST00000219302 LARP4BQ92615 738 aaKnown RBP17■□□□□ 0.31
NME3-201ENST00000219302 GCNAQ96QF7 691 aa17■□□□□ 0.31
NME3-201ENST00000219302 ABI2Q9NYB9 513 aaPredicted RBP17■□□□□ 0.31
NME3-201ENST00000219302 ATG2BQ96BY7 2078 aa17■□□□□ 0.31
NME3-201ENST00000219302 KIF26AQ9ULI4 1882 aaPredicted RBP16.99■□□□□ 0.31
NME3-201ENST00000219302 FOXD2O60548 495 aaPredicted RBP16.99■□□□□ 0.31
NME3-201ENST00000219302 KRT37O76014 449 aa16.99■□□□□ 0.31
NME3-201ENST00000219302 BMP15O95972 392 aa16.99■□□□□ 0.31
NME3-201ENST00000219302 GPR15P49685 360 aa16.99■□□□□ 0.31
NME3-201ENST00000219302 WNT7BP56706 349 aa16.99■□□□□ 0.31
NME3-201ENST00000219302 SF3A1Q15459 793 aaKnown RBP16.99■□□□□ 0.31
NME3-201ENST00000219302 TAF12Q16514 161 aa16.99■□□□□ 0.31
NME3-201ENST00000219302 TXNDC8Q6A555 127 aa16.99■□□□□ 0.31
NME3-201ENST00000219302 SCARA3Q6AZY7 606 aa16.99■□□□□ 0.31
NME3-201ENST00000219302 TRIM68Q6AZZ1 485 aa16.99■□□□□ 0.31
NME3-201ENST00000219302 USP49Q70CQ1 688 aa16.99■□□□□ 0.31
NME3-201ENST00000219302 CEP68Q76N32 757 aa16.99■□□□□ 0.31
NME3-201ENST00000219302 NT5DC4Q86YG4 428 aa16.99■□□□□ 0.31
NME3-201ENST00000219302 MAB21L3Q8N8X9 362 aa16.99■□□□□ 0.31
NME3-201ENST00000219302 EBF3Q9H4W6 596 aa16.99■□□□□ 0.31
NME3-201ENST00000219302 FBRSL1Q9HCM7 1045 aaKnown RBP16.99■□□□□ 0.31
NME3-201ENST00000219302 TDP1Q9NUW8 608 aa16.99■□□□□ 0.31
NME3-201ENST00000219302 PCDHB5Q9Y5E4 795 aa16.99■□□□□ 0.31
NME3-201ENST00000219302 DENND4CQ5VZ89 1909 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms