RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 DNERQ8NFT8 737 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 PGM2Q96G03 612 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 PRMT7Q9NVM4 692 aaPredicted RBP12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 ARHGAP42A6NI28 874 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 LPXNO60711 386 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 DCTN3O75935 186 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 ADSSP30520 456 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 TSNAXIP1Q2TAA8 658 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 MPZL3Q6UWV2 235 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 SPOCD1Q6ZMY3 1216 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 WDR49Q8IV35 697 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 HACE1Q8IYU2 909 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 PPP4R1Q8TF05 950 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 NAALADL1Q9UQQ1 740 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 MYH1P12882 1939 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 EGFRP00533 1210 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 DRG2P55039 364 aaKnown RBP12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 RPL7AP62424 266 aaKnown RBP12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 FAXCQ5TGI0 409 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 BEST2Q8NFU1 509 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 CFAP61Q8NHU2 1237 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 FOXP3Q9BZS1 431 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 SENP1Q9P0U3 644 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 COMMD10Q9Y6G5 202 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 NHSL1Q5SYE7 1610 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 SLC25A27O95847 323 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 PDZD4Q76G19 769 aaPredicted RBP12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 FASTKD5Q7L8L6 764 aaKnown RBP12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 DEPDC1BQ8WUY9 529 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 MFSD14AQ96MC6 490 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 CYTH2Q99418 400 aa12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 PSMC3IPQ9P2W1 217 aaPredicted RBP12.98□□□□□ -0.33
TM9SF4-201ENST00000217315 DHX15O43143 795 aaKnown RBP12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 LCP1P13796 627 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 TNFSF9P41273 254 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 MUM1Q2TAK8 710 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 CATSPERGQ6ZRH7 1159 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 BRSK2Q8IWQ3 736 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 WNK4Q96J92 1243 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 NT5C1AQ9BXI3 368 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 VPS33BQ9H267 617 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 C10orf88Q9H8K7 445 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 SAE1Q9UBE0 346 aaPredicted RBP12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 CREB3O43889 395 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 VTNP04004 478 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 SCTRP47872 440 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 MAMLD1Q13495 774 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 TWF2Q6IBS0 349 aaKnown RBP12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 TTC27Q6P3X3 843 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 SDCCAG8Q86SQ7 713 aaPredicted RBP12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 CCDC125Q86Z20 511 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 LMNTD2Q8IXW0 634 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 ERP27Q96DN0 273 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 ASAP2O43150 1006 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 ESRRAP11474 423 aaPredicted RBP12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 GLRA4Q5JXX5 417 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 GRAMD1AQ96CP6 724 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 NINJ2Q9NZG7 142 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 POLIQ9UNA4 740 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 SMG5Q9UPR3 1016 aaKnown RBP12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 PAPPAQ13219 1627 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 A0A087WZ62 844 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 CCDC195A0A1B0GUA6 201 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 HUS1O60921 280 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 DDNO94850 711 aaPredicted RBP12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 IL18RAPO95256 599 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 KITP10721 976 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 CHRNB2P17787 502 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 KRT4P19013 534 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 ARL1P40616 181 aaPredicted RBP12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 ZBTB41Q5SVQ8 909 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 HEATR6Q6AI08 1181 aaKnown RBP12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 ZPBP2Q6X784 338 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 ANKRD13AQ8IZ07 590 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 PDCD7Q8N8D1 485 aaKnown RBP12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 C3orf20Q8ND61 904 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 CRYGNQ8WXF5 182 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 VCPIP1Q96JH7 1222 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 FDXACB1Q9BRP7 624 aaPredicted RBP12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 AP5M1Q9H0R1 490 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 NPHS2Q9NP85 383 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 ZFP69BQ9UJL9 534 aa12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 NOCTQ9UK39 431 aaKnown RBP12.97□□□□□ -0.33
TM9SF4-201ENST00000217315 SPDYE16A6NNV3 312 aaPredicted RBP12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 KRT38O76015 456 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 BAG2O95816 211 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 STAG3L1P0CL83 205 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 PECAM1P16284 738 aaPredicted RBP12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 CHKAP35790 457 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 TAS2R40P59535 323 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 RNASELQ05823 741 aaKnown RBP12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 AUHQ13825 339 aaKnown RBP12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 CAPSQ13938 189 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 AMHR2Q16671 573 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 LVRNQ6Q4G3 990 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 ZC3H3Q8IXZ2 948 aaKnown RBP12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 CPB2Q96IY4 423 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 LRRC19Q9H756 370 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 STXBP5LQ9Y2K9 1186 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms