RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 CLDN23Q96B33 292 aa23.85■■□□□ 1.41
VTI1B-201ENST00000216456 ZNF396Q96N95 335 aaPredicted RBP23.85■■□□□ 1.41
VTI1B-201ENST00000216456 PIAS3Q9Y6X2 628 aa23.85■■□□□ 1.41
VTI1B-201ENST00000216456 TCHHQ07283 1943 aa23.84■■□□□ 1.41
VTI1B-201ENST00000216456 KRT19P08727 400 aa23.84■■□□□ 1.41
VTI1B-201ENST00000216456 HAPLN1P10915 354 aaPredicted RBP23.84■■□□□ 1.41
VTI1B-201ENST00000216456 ASIC1P78348 528 aa23.84■■□□□ 1.41
VTI1B-201ENST00000216456 CSTF1Q05048 431 aaKnown RBP23.84■■□□□ 1.41
VTI1B-201ENST00000216456 THEM5Q8N1Q8 247 aa23.84■■□□□ 1.41
VTI1B-201ENST00000216456 IRF7Q92985 503 aa23.84■■□□□ 1.41
VTI1B-201ENST00000216456 CHAMP1Q96JM3 812 aa23.84■■□□□ 1.41
VTI1B-201ENST00000216456 PI4K2AQ9BTU6 479 aa23.84■■□□□ 1.41
VTI1B-201ENST00000216456 OSBPL6Q9BZF3 934 aa23.84■■□□□ 1.41
VTI1B-201ENST00000216456 BLZF1Q9H2G9 400 aa23.84■■□□□ 1.41
VTI1B-201ENST00000216456 TNMDQ9H2S6 317 aa23.84■■□□□ 1.41
VTI1B-201ENST00000216456 PATJQ8NI35 1801 aa23.83■■□□□ 1.41
VTI1B-201ENST00000216456 ZNF263O14978 683 aa23.83■■□□□ 1.41
VTI1B-201ENST00000216456 LAMTOR5O43504 91 aa23.83■■□□□ 1.41
VTI1B-201ENST00000216456 PAX3P23760 479 aa23.83■■□□□ 1.41
VTI1B-201ENST00000216456 NT5DC4Q86YG4 428 aa23.83■■□□□ 1.41
VTI1B-201ENST00000216456 GPD1LQ8N335 351 aa23.83■■□□□ 1.41
VTI1B-201ENST00000216456 ZNF560Q96MR9 790 aa23.83■■□□□ 1.41
VTI1B-201ENST00000216456 ASB3Q9Y575 518 aa23.83■■□□□ 1.41
VTI1B-201ENST00000216456 F5P12259 2224 aa23.83■■□□□ 1.4
VTI1B-201ENST00000216456 GVINP1Q7Z2Y8 2422 aa23.82■■□□□ 1.4
VTI1B-201ENST00000216456 SLC38A8A6NNN8 435 aa23.82■■□□□ 1.4
VTI1B-201ENST00000216456 CUTAO60888 179 aa23.82■■□□□ 1.4
VTI1B-201ENST00000216456 YEATS4O95619 227 aa23.82■■□□□ 1.4
VTI1B-201ENST00000216456 LDHAP00338 332 aaKnown RBP23.82■■□□□ 1.4
VTI1B-201ENST00000216456 ZSCAN22P10073 491 aaPredicted RBP23.82■■□□□ 1.4
VTI1B-201ENST00000216456 CCNE1P24864 410 aa23.82■■□□□ 1.4
VTI1B-201ENST00000216456 TUFMP49411 452 aaKnown RBP23.82■■□□□ 1.4
VTI1B-201ENST00000216456 MTAPQ13126 283 aa23.82■■□□□ 1.4
VTI1B-201ENST00000216456 ALCAMQ13740 583 aa23.82■■□□□ 1.4
VTI1B-201ENST00000216456 WDR44Q5JSH3 913 aa23.82■■□□□ 1.4
VTI1B-201ENST00000216456 TMEM150AQ86TG1 271 aa23.82■■□□□ 1.4
VTI1B-201ENST00000216456 GRAMD1CQ8IYS0 662 aa23.82■■□□□ 1.4
VTI1B-201ENST00000216456 DEPDC1BQ8WUY9 529 aa23.82■■□□□ 1.4
VTI1B-201ENST00000216456 TMEM206Q9H813 350 aa23.82■■□□□ 1.4
VTI1B-201ENST00000216456 SNX9Q9Y5X1 595 aa23.82■■□□□ 1.4
VTI1B-201ENST00000216456 POLR2DO15514 142 aaKnown RBP23.81■■□□□ 1.4
VTI1B-201ENST00000216456 TGFB1I1O43294 461 aa23.81■■□□□ 1.4
VTI1B-201ENST00000216456 F13A1P00488 732 aa23.81■■□□□ 1.4
VTI1B-201ENST00000216456 LMNAP02545 664 aaKnown RBP23.81■■□□□ 1.4
VTI1B-201ENST00000216456 EPM2AIP1Q7L775 607 aaPredicted RBP23.81■■□□□ 1.4
VTI1B-201ENST00000216456 ITIH5Q86UX2 942 aa23.81■■□□□ 1.4
VTI1B-201ENST00000216456 NELFCDQ8IXH7 590 aa23.81■■□□□ 1.4
VTI1B-201ENST00000216456 DCLK2Q8N568 766 aa23.81■■□□□ 1.4
VTI1B-201ENST00000216456 RDH13Q8NBN7 331 aa23.81■■□□□ 1.4
VTI1B-201ENST00000216456 FAM3CQ92520 227 aa23.81■■□□□ 1.4
VTI1B-201ENST00000216456 SLC46A2Q9BY10 475 aa23.81■■□□□ 1.4
VTI1B-201ENST00000216456 GPR88Q9GZN0 384 aa23.81■■□□□ 1.4
VTI1B-201ENST00000216456 RBM12Q9NTZ6 932 aaKnown RBP23.81■■□□□ 1.4
VTI1B-201ENST00000216456 DDX43Q9NXZ2 648 aaKnown RBP23.81■■□□□ 1.4
VTI1B-201ENST00000216456 HSPBP1Q9NZL4 362 aa23.81■■□□□ 1.4
VTI1B-201ENST00000216456 HSFX1Q9UBD0 423 aa23.81■■□□□ 1.4
VTI1B-201ENST00000216456 PCDHA7Q9UN72 937 aa23.81■■□□□ 1.4
VTI1B-201ENST00000216456 EP300Q09472 2414 aaPredicted RBP23.81■■□□□ 1.4
VTI1B-201ENST00000216456 CLIC2O15247 247 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 TMEM191BP0C7N4 346 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 HMGA1P17096 107 aaKnown RBP23.8■■□□□ 1.4
VTI1B-201ENST00000216456 CYP2F1P24903 491 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 TNK2Q07912 1038 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 FCHO2Q0JRZ9 810 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 VEPH1Q14D04 833 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 DDR2Q16832 855 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 TXNDC11Q6PKC3 985 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 HSCBQ8IWL3 235 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 YAF2Q8IY57 180 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 SPPL2BQ8TCT7 592 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 CACTINQ8WUQ7 758 aaKnown RBP23.8■■□□□ 1.4
VTI1B-201ENST00000216456 PKMYT1Q99640 499 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 LMAN1LQ9HAT1 526 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 INTS13Q9NVM9 706 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 GTSE1Q9NYZ3 720 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 GTF3C4Q9UKN8 822 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 PCDHB5Q9Y5E4 795 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 DCHS1Q96JQ0 3298 aa23.8■■□□□ 1.4
VTI1B-201ENST00000216456 GPR179Q6PRD1 2367 aa23.79■■□□□ 1.4
VTI1B-201ENST00000216456 HUS1O60921 280 aa23.79■■□□□ 1.4
VTI1B-201ENST00000216456 ATP2C2O75185 946 aa23.79■■□□□ 1.4
VTI1B-201ENST00000216456 PRPF40AO75400 957 aaKnown RBP23.79■■□□□ 1.4
VTI1B-201ENST00000216456 HOXC13P31276 330 aa23.79■■□□□ 1.4
VTI1B-201ENST00000216456 PNPLA4P41247 253 aa23.79■■□□□ 1.4
VTI1B-201ENST00000216456 RBP5P82980 135 aa23.79■■□□□ 1.4
VTI1B-201ENST00000216456 GAS6Q14393 721 aa23.79■■□□□ 1.4
VTI1B-201ENST00000216456 SOWAHAQ2M3V2 549 aa23.79■■□□□ 1.4
VTI1B-201ENST00000216456 FAM26FQ5R3K3 315 aa23.79■■□□□ 1.4
VTI1B-201ENST00000216456 DCP1BQ8IZD4 617 aaKnown RBP23.79■■□□□ 1.4
VTI1B-201ENST00000216456 LRRC52Q8N7C0 313 aa23.79■■□□□ 1.4
VTI1B-201ENST00000216456 IQUBQ8NA54 791 aa23.79■■□□□ 1.4
VTI1B-201ENST00000216456 RIN3Q8TB24 985 aa23.79■■□□□ 1.4
VTI1B-201ENST00000216456 NELL2Q99435 816 aa23.79■■□□□ 1.4
VTI1B-201ENST00000216456 C7orf25Q9BPX7 421 aa23.79■■□□□ 1.4
VTI1B-201ENST00000216456 TRPV5Q9NQA5 729 aa23.79■■□□□ 1.4
VTI1B-201ENST00000216456 ITGA11Q9UKX5 1188 aa23.79■■□□□ 1.4
VTI1B-201ENST00000216456 MAGED2Q9UNF1 606 aaPredicted RBP23.79■■□□□ 1.4
VTI1B-201ENST00000216456 CCL26Q9Y258 94 aa23.79■■□□□ 1.4
VTI1B-201ENST00000216456 MRPS17Q9Y2R5 130 aaKnown RBP23.79■■□□□ 1.4
VTI1B-201ENST00000216456 SPTBN4Q9H254 2564 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms