RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 PHLDB2Q86SQ0 1253 aa15.17■□□□□ 0.02
RTFDC1-201ENST00000023939 RSPH3Q86UC2 560 aa15.17■□□□□ 0.02
RTFDC1-201ENST00000023939 KATNAL2Q8IYT4 538 aa15.17■□□□□ 0.02
RTFDC1-201ENST00000023939 TMEM130Q8N3G9 435 aa15.17■□□□□ 0.02
RTFDC1-201ENST00000023939 ERVK-5Q9HDB9 667 aa15.17■□□□□ 0.02
RTFDC1-201ENST00000023939 MED4Q9NPJ6 270 aa15.17■□□□□ 0.02
RTFDC1-201ENST00000023939 HMGXB4Q9UGU5 601 aa15.17■□□□□ 0.02
RTFDC1-201ENST00000023939 SMIM28A0A1B0GU29 152 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 PIRO00625 290 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 ATF7P17544 494 aaPredicted RBP15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 GABRB2P47870 512 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 DRG2P55039 364 aaKnown RBP15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 CACNB2Q08289 660 aaPredicted RBP15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 PIGHQ14442 188 aaPredicted RBP15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 PTPN20Q4JDL3 420 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 SGO2Q562F6 1265 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 C9orf57Q5W0N0 161 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 LCLAT1Q6UWP7 414 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 CXCL17Q6UXB2 119 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 SERINC5Q86VE9 423 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 ZDHHC14Q8IZN3 488 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 KLHDC9Q8NEP7 349 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 FNIP1Q8TF40 1166 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 HINFPQ9BQA5 517 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 NT5C1AQ9BXI3 368 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 RAB17Q9H0T7 212 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 CXCL16Q9H2A7 254 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 FAM114A2Q9NRY5 505 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 NFU1Q9UMS0 254 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 HES2Q9Y543 173 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 TRPV2Q9Y5S1 764 aa15.16■□□□□ 0.02
RTFDC1-201ENST00000023939 ESYT3A0FGR9 886 aa15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 SIGLEC16A6NMB1 481 aa15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 M0QZ92 97 aa15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 TTI1O43156 1089 aa15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 MICAL2O94851 1124 aa15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 ECHS1P30084 290 aa15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 PNPLA4P41247 253 aa15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 FNTAP49354 379 aa15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 NDST1P52848 882 aa15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 RPL7AP62424 266 aaKnown RBP15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 DR1Q01658 176 aa15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 ZNF268Q14587 947 aaPredicted RBP15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 FAM228AQ86W67 206 aa15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 UNC93AQ86WB7 457 aa15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 EXD1Q8NHP7 514 aa15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 SLCO2A1Q92959 643 aa15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 LRRC19Q9H756 370 aa15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 TUBGCP4Q9UGJ1 667 aa15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 CYTH4Q9UIA0 394 aa15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 UTP11Q9Y3A2 253 aaKnown RBP15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 TRIP12Q14669 1992 aaPredicted RBP15.15■□□□□ 0.02
RTFDC1-201ENST00000023939 PGK1P00558 417 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 RARAP10276 462 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 PTGIRP43119 386 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 GPD2P43304 727 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 TAS2R40P59535 323 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 SP3Q02447 781 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 GABPB1Q06547 395 aaPredicted RBP15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 ZNF252P-AS1Q0IIN9 211 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 ALS2CLQ60I27 953 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 DUPD1Q68J44 220 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 CCSAPQ6IQ19 270 aaPredicted RBP15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 GDF6Q6KF10 455 aaPredicted RBP15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 LIMS2Q7Z4I7 341 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 SMG8Q8ND04 991 aaKnown RBP15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 IFT81Q8WYA0 676 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 MAGOHBQ96A72 148 aaKnown RBP15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 C18orf25Q96B23 403 aaPredicted RBP15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 C18orf8Q96DM3 657 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 HEXIM2Q96MH2 286 aaKnown RBP15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 MIS12Q9H081 205 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 XPNPEP3Q9NQH7 507 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 CHST12Q9NRB3 414 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 GDAP2Q9NXN4 497 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 IPPQ9Y573 584 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 CDY2AQ9Y6F7 541 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 PDCD11Q14690 1871 aaKnown RBP15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 H3BQF6 201 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 PODXLO00592 558 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 CAPN15O75808 1086 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 OAS2P29728 719 aaKnown RBP15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 FAM193AP78312 1265 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 DCUN1D2Q6PH85 259 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 PAXIP1Q6ZW49 1069 aaPredicted RBP15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 MCRS1Q96EZ8 462 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 ZNF560Q96MR9 790 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 MCEEQ96PE7 176 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 CPXM1Q96SM3 734 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 ERP44Q9BS26 406 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 SENP6Q9GZR1 1112 aaPredicted RBP15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 RASAL2Q9UJF2 1139 aa15.14■□□□□ 0.01
RTFDC1-201ENST00000023939 TCRBV7S2A1N4TA0A589 114 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 PPEF2O14830 753 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 FAM163BP0C2L3 166 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 SETSIPP0DME0 302 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 AKAP5P24588 427 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 GBP1P32455 592 aa15.13■□□□□ 0.01
RTFDC1-201ENST00000023939 COILP38432 576 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms