RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Ubr3Q5U430 1889 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Gpr180Q8BPS4 441 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Rint1Q8BZ36 792 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Rem2Q8VEL9 341 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Ddit4Q9D3F7 229 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Xab2Q9DCD2 855 aaKnown RBP16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 SyncQ9EPM5 470 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 M1apQ9Z0E1 529 aa16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 NesQ6P5H2 1864 aaKnown RBP16.13■□□□□ 0.17
Upf1-202ENSMUST00000215817 Cfap44E9Q5M6 1843 aa16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Bfsp1A2AMT1 669 aa16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Usp10P52479 792 aaKnown RBP16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Pacsin1Q61644 441 aa16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 EpgnQ924X1 152 aa16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Irx5Q9JKQ4 484 aa16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Cyp4a12bA2A974 508 aa16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Sec24cG3X972 1096 aaKnown RBP16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Rhot1Q8BG51 631 aa16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Vcpip1Q8CDG3 1220 aa16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Sik2Q8CFH6 931 aa16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Cyp4a12aQ91WL5 508 aa16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Zcchc8Q9CYA6 709 aaKnown RBP16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 EcsitQ9QZH6 435 aa16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Trim10Q9WUH5 489 aa16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Krt8P11679 490 aaKnown RBP16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Oca2Q62052 833 aa16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Fam118bQ8C569 351 aa16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Ccdc81Q9D5W4 654 aa16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Tspan17Q9D7W4 270 aa16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Nup98Q6PFD9 1816 aaKnown RBP16.12■□□□□ 0.17
Upf1-202ENSMUST00000215817 Ptchd4B9EKX1 904 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Tcp10cE9Q046 482 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Cyp4f40G3UW81 524 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Mybl1P51960 751 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Mapre1Q61166 268 aaKnown RBP16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Mtmr10Q7TPM9 771 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Nop9Q8BMC4 636 aaKnown RBP16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Rhpn2Q8BWR8 686 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Vps37bQ8R0J7 285 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Nxnl1Q8VC33 217 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Slc14a1Q8VHL0 384 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Trpv6Q91WD2 767 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Ttc1Q91Z38 292 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 DmgdhQ9DBT9 869 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Gm44511A0A0N4SW10 223 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Fpr-rs4A4FUQ5 323 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Unc13dB2RUP2 1085 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Gm5926E9PWJ8 236 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Oas1aP11928 367 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 ZfxP17012 799 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Klrb1bP27812 223 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Ppp2r5eQ61151 467 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Scube3Q66PY1 993 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Olfml3Q8BK62 406 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 KyQ8C8H8 661 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Oas1gQ8K469 367 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Mtmr6Q8VE11 617 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Olfr1353Q8VGU8 309 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Rilpl2Q99LE1 197 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Gml2G5E8L7 176 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 YwhagP61982 247 aaKnown RBP16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 TfrcQ62351 763 aaKnown RBP16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Ephb1Q8CBF3 984 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Krt222Q8CCX5 294 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 LgsnQ8CIX8 563 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 PmpcbQ9CXT8 489 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Spata17Q9D552 379 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Ccdc124Q9D8X2 217 aaKnown RBP16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Tnfsf13bQ9WU72 309 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Gm4302E9PX25 294 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Ifnar1P33896 590 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Brcc3P46737 291 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Ccr5P51682 354 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Cyp2j11Q3UNV2 504 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Kctd19Q562E2 927 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Znf512Q69Z99 562 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Rassf6Q80UQ2 353 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 UvragQ8K245 698 aa16.11■□□□□ 0.17
Upf1-202ENSMUST00000215817 Olfr456B2RT27 312 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Gm3252E9PUT9 216 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Gm3468E9QAJ8 216 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 PuraP42669 321 aaKnown RBP16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Resp18P47939 175 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Wdr35Q8BND3 1181 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Fam78aQ8C552 283 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Gm5591Q8CDK1 855 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Olfr458Q8VF80 313 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Olfr457Q8VGP5 313 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 CarfQ8VHI4 689 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Fbxo32Q9CPU7 355 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Ltn1Q6A009 1767 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Smpd2O70572 419 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Rmdn3Q3UJU9 470 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Gtf2a2Q80ZM7 109 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Q8CCC3 530 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Btbd6Q8K2J9 488 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 HyiQ8R1F5 277 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Prpsap1Q9D0M1 356 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 Krt71Q9R0H5 524 aa16.1■□□□□ 0.17
Upf1-202ENSMUST00000215817 TdrkhQ80VL1 560 aa16.1■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms