RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 OtoaQ8K561 1137 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 PpieQ9QZH3 301 aaKnown RBP9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Pld1Q9Z280 1074 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Myh14Q6URW6 2000 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ddi2A2ADY9 399 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ugt1a5B2RT14 529 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Pnldc1B2RXZ1 531 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Vmn2r79E9Q067 851 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Spata31E9QAF0 1014 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Slc1a1P51906 523 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Vamp7P70280 220 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Plcl1Q3USB7 1096 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ripor1Q68FE6 1223 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Pcdhb14Q6PB90 796 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 GanQ8CA72 597 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gpr1Q8K087 353 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Thap2Q9D305 217 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Fam84aQ9D650 292 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Acsl4Q9QUJ7 711 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Myom2Q14BI5 1463 aa9.7□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Pramef6A2A8M8 474 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Rab17P35292 214 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ugt3a1Q3UP75 523 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 9930111J21Rik1Q5SVP0 844 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Zfyve28Q6ZPK7 905 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Olfr295Q7TS08 309 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Camkk2Q8C078 588 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tbc1d14Q8CGA2 694 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Akr1c21Q91WR5 323 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Echdc3Q9D7J9 300 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 SphkapQ6NSW3 1687 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Dennd5bA2RSQ0 1274 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 PtproE9Q612 1226 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Phkg1P07934 388 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 UmpsP13439 481 aaKnown RBP9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 PorP37040 678 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Psd3Q2PFD7 1037 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Snip1Q8BIZ6 383 aaKnown RBP9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 RybpQ8CCI5 228 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Slc47a1Q8K0H1 567 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Slc30a5Q8R4H9 761 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Cd248Q91V98 765 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Nme5Q99MH5 211 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 DcpsQ9DAR7 338 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Nfx1B1AY10 1114 aaKnown RBP9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 MttpO08601 894 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Npas2P97460 816 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Samd11Q1RNF8 542 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Traf3Q60803 567 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Slc9a1Q61165 820 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Hspa13Q8BM72 471 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ndufa10Q99LC3 355 aaKnown RBP9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 S100pbpQ9D5K4 396 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Bloc1s6Q9R0C0 172 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Rasgrp1Q9Z1S3 795 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Myo3bQ1EG27 1305 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gm8906L7N2A2 181 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gnat1P20612 350 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Pdha2P35487 391 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tatdn3Q3U1C6 294 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Naf1Q3UMQ8 489 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Akap4Q60662 849 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Grid1Q61627 1009 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tfdp2Q64163 446 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ces1eQ64176 562 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Psmd5Q8BJY1 504 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Zfp398Q8BV16 643 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Fam151aQ8QZW3 608 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tnfrsf21Q9EPU5 655 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gprc5dQ9JIL6 344 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 FliiQ9JJ28 1271 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 PodxlQ9R0M4 503 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Rrn3B2RS91 656 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 CcnoP0C242 352 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 DselQ0VBN2 1207 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Xxylt1Q3U4G3 392 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ceacam5Q3UKK2 947 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ckap4Q8BMK4 575 aaKnown RBP9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Taf5Q8C092 801 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Zbtb8bQ8CII0 484 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Oas1dQ8VI95 361 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Kdm6aO70546 1401 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Lrrc7Q80TE7 1490 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gm45261A0A1B0GSP6 197 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gm5072A2AHM1 344 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Cd3dP04235 173 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 FgrP14234 517 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 ItgalP24063 1163 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 CrklP47941 303 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ddx3yQ62095 658 aaKnown RBP9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 SyncripQ7TMK9 623 aaKnown RBP9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 4930504O13RikQ8C5Z9 145 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Zcchc18Q8VD24 393 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Dctn2Q99KJ8 402 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Hspbp1Q99P31 357 aaKnown RBP9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Add3Q9QYB5 706 aaKnown RBP9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Uts2Q9QZQ3 123 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Capn7Q9R1S8 813 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Cul9Q80TT8 1865 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ccdc88cQ6VGS5 2009 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms