RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Ush1gQ80T11 461 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Zhx3Q8C0Q2 951 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Q91WD4 421 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 4933425L06RikQ9D3Z8 585 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Rpn2Q9DBG6 631 aaKnown RBP14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Hmg20aQ9DC33 346 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Mrpl4Q9DCU6 294 aaKnown RBP14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tlx1P43345 332 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Oas1fQ14AZ4 364 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Pdap1Q3UHX2 181 aaKnown RBP14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Ankrd27Q3UMR0 1048 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Thoc5Q8BKT7 683 aaKnown RBP14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Cdc42bpbQ7TT50 1713 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gm7168A0AUV4 508 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 EXOC1LB9EK06 172 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 D830030K20RikE9PYQ5 218 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gm3043K7N693 218 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 SykP48025 629 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Csnk2bP67871 215 aaKnown RBP14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Asprv1Q09PK2 339 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tmcc2Q80W04 706 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Ppp1r37Q8BKR5 712 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Fbxw7Q8VBV4 629 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Arhgef3Q91X46 524 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Serpini2Q9JK88 405 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Actl7aQ9QY84 440 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Col15a1O35206 1367 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Scgb2b7D3YYY1 112 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Zfp607aQ3TQG9 686 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Trim65Q8BFW4 522 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 CherpQ8CGZ0 936 aaKnown RBP14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Fam45aQ9D8N2 357 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Knl1Q66JQ7 1612 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gm5799E9Q2M1 201 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Hspa1bP17879 642 aaKnown RBP14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Kcnma1Q08460 1209 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Znf496Q5SXI5 585 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tspyl5Q69ZB3 406 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Myl12aQ6ZWQ9 172 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 BspryQ80YW5 473 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tph2Q8CGV2 488 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tspan14Q8QZY6 270 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Dync1li1Q8R1Q8 523 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Rasgrp1Q9Z1S3 795 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gemin5Q8BX17 1502 aaKnown RBP14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Myh7bA2AQP0 1941 aa14.5□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Kif28pD3YXS5 1028 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 GabrdP22933 449 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 BrafP28028 804 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 BfarQ8R079 450 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Eif4enif1Q9EST3 983 aaKnown RBP14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Neu2Q9JMH3 379 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Khdrbs3Q9R226 346 aaKnown RBP14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 ItgalP24063 1163 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 SftpdP50404 374 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Exoc3l4Q6DIA2 721 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Llgl1Q80Y17 1036 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Cep95Q8BVV7 827 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Mrpl50Q8VDT9 159 aaKnown RBP14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Prmt3Q922H1 532 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Ncam1P13595 1115 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 UrosP51163 265 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 HexdcQ3U4H6 486 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Ccna1Q61456 421 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Ifi47Q61635 420 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 RetsatQ64FW2 609 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Olfr293Q7TS10 336 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Serpinb1aQ9D154 379 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gm32742A0A1B0GT42 1604 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 C87977A2A958 498 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 MyrfQ3UR85 1138 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Enoph1Q8BGB7 257 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Smndc1Q8BGT7 238 aaKnown RBP14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 PccaQ91ZA3 724 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gm43518A0A0G2JGB6 165 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gm12794L7MTS5 483 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 RalaP63321 206 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Hmgxb4Q80Y32 594 aaKnown RBP14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Lrrc24Q8BHA1 521 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Cpa5Q8R4H4 436 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Olfr1467Q8VFW1 308 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Nme5Q99MH5 211 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Mrto4Q9D0I8 239 aaKnown RBP14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Mdc1Q5PSV9 1707 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Vmn2r31L7N1Z4 861 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Teddm2Q208S0 260 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Plekha7Q3UIL6 1118 aaKnown RBP14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Rbl2Q64700 1135 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Hspbp1Q99P31 357 aaKnown RBP14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Vps33bP59016 617 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Sco1Q5SUC9 284 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 SnphQ80U23 495 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 FlcnQ8QZS3 579 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Mageb16Q9CWV4 363 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Serbp1Q9CY58 407 aaKnown RBP14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Rbck1Q9WUB0 508 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 GakQ99KY4 1305 aa14.49□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Dot1lQ6XZL8 1540 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Togaram2Q3TYG6 1002 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Usp7Q6A4J8 1103 aa14.48□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 80.2 ms