RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C SLX9P53251 210 aaPredicted RBP2.14□□□□□ -2.07
DNL4YOR005C YNR066CP53752 436 aa2.14□□□□□ -2.07
DNL4YOR005C PIR1Q03178 341 aa2.14□□□□□ -2.07
DNL4YOR005C TMA23Q03525 211 aa2.14□□□□□ -2.07
DNL4YOR005C YMR253CQ04835 414 aa2.14□□□□□ -2.07
DNL4YOR005C SNA4Q07549 140 aa2.14□□□□□ -2.07
DNL4YOR005C COQ10Q08058 207 aa2.14□□□□□ -2.07
DNL4YOR005C RAD28Q12021 506 aa2.14□□□□□ -2.07
DNL4YOR005C FYV7Q12247 151 aa2.14□□□□□ -2.07
DNL4YOR005C COX19Q3E731 98 aa2.14□□□□□ -2.07
DNL4YOR005C ADK1P07170 222 aaKnown RBP2.14□□□□□ -2.07
DNL4YOR005C ATP5P09457 212 aa2.14□□□□□ -2.07
DNL4YOR005C YIL067CP40514 678 aa2.14□□□□□ -2.07
DNL4YOR005C YFR057WP43625 151 aa2.14□□□□□ -2.07
DNL4YOR005C YJR056CP47115 236 aa2.14□□□□□ -2.07
DNL4YOR005C EST3Q03096 181 aa2.14□□□□□ -2.07
DNL4YOR005C ADD37Q03233 198 aa2.14□□□□□ -2.07
DNL4YOR005C HNT1Q04344 158 aaKnown RBP2.14□□□□□ -2.07
DNL4YOR005C YPR098CQ06089 161 aa2.14□□□□□ -2.07
DNL4YOR005C HEM25Q07534 307 aa2.14□□□□□ -2.07
DNL4YOR005C GRE1Q08969 168 aa2.14□□□□□ -2.07
DNL4YOR005C YDL211CQ12121 372 aa2.14□□□□□ -2.07
DNL4YOR005C RFM1Q12192 310 aa2.14□□□□□ -2.07
DNL4YOR005C YER078W-AQ3E7A2 54 aa2.14□□□□□ -2.07
DNL4YOR005C YCL021W-AQ96VH3 125 aa2.14□□□□□ -2.07
DNL4YOR005C PAU19P0CE85 124 aa2.13□□□□□ -2.07
DNL4YOR005C PAU21P0CE86 164 aa2.13□□□□□ -2.07
DNL4YOR005C PAU22P0CE87 164 aa2.13□□□□□ -2.07
DNL4YOR005C FUN14P18411 198 aa2.13□□□□□ -2.07
DNL4YOR005C PAU3P25610 124 aa2.13□□□□□ -2.07
DNL4YOR005C ATG15P25641 520 aa2.13□□□□□ -2.07
DNL4YOR005C YOR062CP36025 268 aa2.13□□□□□ -2.07
DNL4YOR005C PAN3P36102 679 aaPredicted RBP2.13□□□□□ -2.07
DNL4YOR005C YBR292CP38357 123 aa2.13□□□□□ -2.07
DNL4YOR005C TIM17P39515 158 aa2.13□□□□□ -2.07
DNL4YOR005C RFC2P40348 353 aa2.13□□□□□ -2.07
DNL4YOR005C DLS1P40366 167 aa2.13□□□□□ -2.07
DNL4YOR005C FLX1P40464 311 aa2.13□□□□□ -2.07
DNL4YOR005C UFD1P53044 361 aa2.13□□□□□ -2.07
DNL4YOR005C NSA1P53136 463 aaPredicted RBP2.13□□□□□ -2.07
DNL4YOR005C SDS23P53172 527 aa2.13□□□□□ -2.07
DNL4YOR005C ALG13P53178 202 aa2.13□□□□□ -2.07
DNL4YOR005C CRH1P53301 507 aa2.13□□□□□ -2.07
DNL4YOR005C AVO2Q04749 426 aa2.13□□□□□ -2.07
DNL4YOR005C RRS1Q08746 203 aaKnown RBP2.13□□□□□ -2.07
DNL4YOR005C YDL085C-AQ3E7B7 68 aaKnown RBP2.13□□□□□ -2.07
DNL4YOR005C MSB2P32334 1306 aa2.13□□□□□ -2.07
DNL4YOR005C HHF1P02309 103 aaKnown RBP2.13□□□□□ -2.07
DNL4YOR005C KIN28P06242 306 aa2.13□□□□□ -2.07
DNL4YOR005C URA6P15700 204 aa2.13□□□□□ -2.07
DNL4YOR005C STP22P25604 385 aa2.13□□□□□ -2.07
DNL4YOR005C SNC2P33328 115 aa2.13□□□□□ -2.07
DNL4YOR005C MRPL28P36527 147 aa2.13□□□□□ -2.07
DNL4YOR005C YNL208WP40159 199 aaKnown RBP2.13□□□□□ -2.07
DNL4YOR005C GPI14P47088 403 aaKnown RBP2.13□□□□□ -2.07
DNL4YOR005C YGL262WP53054 175 aa2.13□□□□□ -2.07
DNL4YOR005C YGR042WP53227 271 aa2.13□□□□□ -2.07
DNL4YOR005C MPA43P53583 542 aaPredicted RBP2.13□□□□□ -2.07
DNL4YOR005C SDC1Q03323 175 aa2.13□□□□□ -2.07
DNL4YOR005C SYM1Q06563 197 aa2.13□□□□□ -2.07
DNL4YOR005C YOR292CQ08743 309 aa2.13□□□□□ -2.07
DNL4YOR005C FDH1Q08911 376 aa2.13□□□□□ -2.07
DNL4YOR005C ERV2Q12284 196 aa2.13□□□□□ -2.07
DNL4YOR005C YLR146W-AQ2V2P1 62 aa2.13□□□□□ -2.07
DNL4YOR005C NAG1Q8TGN9 163 aa2.13□□□□□ -2.07
DNL4YOR005C PET20Q99373 253 aa2.13□□□□□ -2.07
DNL4YOR005C MDM35O60200 86 aa2.13□□□□□ -2.07
DNL4YOR005C RPL28P02406 149 aaKnown RBP2.13□□□□□ -2.07
DNL4YOR005C PPH21P23594 369 aa2.13□□□□□ -2.07
DNL4YOR005C FMT1P32785 401 aa2.13□□□□□ -2.07
DNL4YOR005C YBR013CP38215 129 aa2.13□□□□□ -2.07
DNL4YOR005C TVP23P38962 199 aa2.13□□□□□ -2.07
DNL4YOR005C IRC22P40006 225 aa2.13□□□□□ -2.07
DNL4YOR005C PHS1P40857 217 aa2.13□□□□□ -2.07
DNL4YOR005C SAE3P89114 91 aa2.13□□□□□ -2.07
DNL4YOR005C CYT2Q00873 224 aa2.13□□□□□ -2.07
DNL4YOR005C JID1Q12350 301 aa2.13□□□□□ -2.07
DNL4YOR005C SGA1P08019 549 aa2.12□□□□□ -2.07
DNL4YOR005C SCL1P21243 252 aaKnown RBP2.12□□□□□ -2.07
DNL4YOR005C POP7P38291 140 aa2.12□□□□□ -2.07
DNL4YOR005C YEA6P39953 335 aa2.12□□□□□ -2.07
DNL4YOR005C YEA4P40004 342 aa2.12□□□□□ -2.07
DNL4YOR005C GLC8P41818 229 aa2.12□□□□□ -2.07
DNL4YOR005C TRM9P49957 279 aa2.12□□□□□ -2.07
DNL4YOR005C NRM1P53718 249 aa2.12□□□□□ -2.07
DNL4YOR005C PIN3Q06449 215 aa2.12□□□□□ -2.07
DNL4YOR005C ODC2Q99297 307 aa2.12□□□□□ -2.07
DNL4YOR005C WSC4P38739 605 aa2.12□□□□□ -2.07
DNL4YOR005C HSP10P38910 106 aa2.12□□□□□ -2.07
DNL4YOR005C OST3P48439 350 aa2.12□□□□□ -2.07
DNL4YOR005C FLC3P53121 802 aa2.12□□□□□ -2.07
DNL4YOR005C YLR152CP54072 576 aa2.12□□□□□ -2.07
DNL4YOR005C NMA1Q06178 401 aaKnown RBP2.12□□□□□ -2.07
DNL4YOR005C RRT7Q07829 113 aa2.12□□□□□ -2.07
DNL4YOR005C AKR2Q12013 749 aa2.12□□□□□ -2.07
DNL4YOR005C IZH2Q12442 317 aa2.12□□□□□ -2.07
DNL4YOR005C YNR034W-AQ3E841 98 aa2.12□□□□□ -2.07
DNL4YOR005C QCR2P07257 368 aa2.11□□□□□ -2.07
DNL4YOR005C FRM2P37261 193 aa2.11□□□□□ -2.07
DNL4YOR005C REE1P40893 198 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 139.2 ms