RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W TMA23Q03525 211 aa6.34□□□□□ -1.39
SHC1YER096W AVO2Q04749 426 aa6.34□□□□□ -1.39
SHC1YER096W CTR3Q06686 241 aa6.34□□□□□ -1.39
SHC1YER096W SPO24Q3E752 67 aa6.34□□□□□ -1.39
SHC1YER096W LDS1P31379 325 aa6.33□□□□□ -1.4
SHC1YER096W SRB6P32570 121 aa6.33□□□□□ -1.4
SHC1YER096W YJR015WP47090 510 aa6.33□□□□□ -1.4
SHC1YER096W SNO1Q03144 224 aa6.33□□□□□ -1.4
SHC1YER096W YMR166CQ03829 368 aa6.33□□□□□ -1.4
SHC1YER096W YLR179CQ06252 201 aaKnown RBP6.33□□□□□ -1.4
SHC1YER096W NDE2Q07500 545 aa6.33□□□□□ -1.4
SHC1YER096W MRP2P10663 115 aaPredicted RBP6.32□□□□□ -1.4
SHC1YER096W BGL2P15703 313 aaKnown RBP6.32□□□□□ -1.4
SHC1YER096W RPL14AP36105 138 aaKnown RBP6.32□□□□□ -1.4
SHC1YER096W YBR292CP38357 123 aa6.32□□□□□ -1.4
SHC1YER096W RPL14BP38754 138 aaKnown RBP6.32□□□□□ -1.4
SHC1YER096W LSM4P40070 187 aaKnown RBP6.32□□□□□ -1.4
SHC1YER096W LST8P41318 303 aa6.32□□□□□ -1.4
SHC1YER096W JID1Q12350 301 aa6.32□□□□□ -1.4
SHC1YER096W YMR316C-AI2HB70 103 aa6.31□□□□□ -1.4
SHC1YER096W HEM13P11353 328 aaKnown RBP6.31□□□□□ -1.4
SHC1YER096W DAL3P32459 195 aa6.31□□□□□ -1.4
SHC1YER096W QDR3P38227 689 aa6.31□□□□□ -1.4
SHC1YER096W YMR253CQ04835 414 aa6.31□□□□□ -1.4
SHC1YER096W PCC1Q3E833 88 aa6.31□□□□□ -1.4
SHC1YER096W PRE9P23638 258 aaKnown RBP6.3□□□□□ -1.4
SHC1YER096W TCA17P32613 152 aa6.3□□□□□ -1.4
SHC1YER096W DUT1P33317 147 aa6.3□□□□□ -1.4
SHC1YER096W POS5Q06892 414 aa6.3□□□□□ -1.4
SHC1YER096W TY1A-LR4P0C2I8 440 aaKnown RBP6.3□□□□□ -1.4
SHC1YER096W TY1A-DR6P0CX70 440 aa6.3□□□□□ -1.4
SHC1YER096W TY1A-ER1P0CX71 440 aa6.3□□□□□ -1.4
SHC1YER096W TY1A-LR2P0CX72 440 aa6.3□□□□□ -1.4
SHC1YER096W TY1A-PLP0CX73 440 aa6.3□□□□□ -1.4
SHC1YER096W TY1A-JR1P0CX74 440 aa6.3□□□□□ -1.4
SHC1YER096W TY1A-LR3P0CX75 440 aa6.3□□□□□ -1.4
SHC1YER096W TY1A-ML2P0CX76 440 aa6.3□□□□□ -1.4
SHC1YER096W SHB17P36136 271 aaKnown RBP6.3□□□□□ -1.4
SHC1YER096W SHG1P38337 142 aa6.3□□□□□ -1.4
SHC1YER096W YPT31P38555 223 aaKnown RBP6.3□□□□□ -1.4
SHC1YER096W YJL163CP46996 555 aa6.3□□□□□ -1.4
SHC1YER096W ABM1P47146 123 aa6.3□□□□□ -1.4
SHC1YER096W YGR018CP53211 109 aa6.3□□□□□ -1.4
SHC1YER096W SHH3Q04487 196 aa6.3□□□□□ -1.4
SHC1YER096W IRC23Q08416 157 aa6.3□□□□□ -1.4
SHC1YER096W TY1A-GR1Q12085 440 aa6.3□□□□□ -1.4
SHC1YER096W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.3□□□□□ -1.4
SHC1YER096W TY1A-OLQ92392 440 aaKnown RBP6.3□□□□□ -1.4
SHC1YER096W QCR9P22289 66 aa6.29□□□□□ -1.4
SHC1YER096W ECM25P32525 599 aa6.29□□□□□ -1.4
SHC1YER096W PIC2P40035 300 aa6.29□□□□□ -1.4
SHC1YER096W YIP1P53039 248 aa6.29□□□□□ -1.4
SHC1YER096W SSU72P53538 206 aaPredicted RBP6.29□□□□□ -1.4
SHC1YER096W BOR1P53838 576 aa6.29□□□□□ -1.4
SHC1YER096W YCR022CP25620 114 aa6.28□□□□□ -1.4
SHC1YER096W YPS1P32329 569 aa6.28□□□□□ -1.4
SHC1YER096W RIB5P38145 238 aa6.28□□□□□ -1.4
SHC1YER096W DER1P38307 211 aa6.28□□□□□ -1.4
SHC1YER096W RTC3P38804 111 aaPredicted RBP6.28□□□□□ -1.4
SHC1YER096W YAR068WP39564 161 aa6.28□□□□□ -1.4
SHC1YER096W SMD3P43321 101 aaKnown RBP6.28□□□□□ -1.4
SHC1YER096W PAU4P53427 120 aa6.28□□□□□ -1.4
SHC1YER096W SME1Q12330 94 aaPredicted RBP6.28□□□□□ -1.4
SHC1YER096W PAA1Q12447 191 aaKnown RBP6.28□□□□□ -1.4
SHC1YER096W TDH1P00360 332 aaKnown RBP6.27□□□□□ -1.41
SHC1YER096W PIS1P06197 220 aaKnown RBP6.27□□□□□ -1.41
SHC1YER096W TRP4P07285 380 aaPredicted RBP6.27□□□□□ -1.41
SHC1YER096W TOM40P23644 387 aaKnown RBP6.27□□□□□ -1.41
SHC1YER096W MIA40P36046 403 aa6.27□□□□□ -1.41
SHC1YER096W BDH1P39714 382 aa6.27□□□□□ -1.41
SHC1YER096W GPP2P40106 250 aaKnown RBP6.27□□□□□ -1.41
SHC1YER096W LOC1P43586 204 aaPredicted RBP6.27□□□□□ -1.41
SHC1YER096W TAX4P47030 604 aa6.27□□□□□ -1.41
SHC1YER096W RIB4P50861 169 aaPredicted RBP6.27□□□□□ -1.41
SHC1YER096W MIC27P50945 234 aa6.27□□□□□ -1.41
SHC1YER096W YPR145C-AQ2V2P0 78 aa6.27□□□□□ -1.41
SHC1YER096W LST7P53237 242 aa6.26□□□□□ -1.41
SHC1YER096W YML122CQ03207 126 aa6.26□□□□□ -1.41
SHC1YER096W PBP4Q07362 185 aaKnown RBP6.26□□□□□ -1.41
SHC1YER096W YOR352WQ08816 343 aa6.26□□□□□ -1.41
SHC1YER096W ERV2Q12284 196 aa6.26□□□□□ -1.41
SHC1YER096W PAU1P0CE88 120 aa6.25□□□□□ -1.41
SHC1YER096W PAU14P0CE89 120 aa6.25□□□□□ -1.41
SHC1YER096W PAU6P0CE90 120 aa6.25□□□□□ -1.41
SHC1YER096W PAU18P0CE91 120 aa6.25□□□□□ -1.41
SHC1YER096W PAU8P0CE92 120 aa6.25□□□□□ -1.41
SHC1YER096W PAU11P0CE93 120 aa6.25□□□□□ -1.41
SHC1YER096W RAD23P32628 398 aaKnown RBP6.25□□□□□ -1.41
SHC1YER096W YBL071CP38185 102 aa6.25□□□□□ -1.41
SHC1YER096W PAU13P38725 120 aa6.25□□□□□ -1.41
SHC1YER096W PTC7P38797 343 aa6.25□□□□□ -1.41
SHC1YER096W ATG27P46989 271 aa6.25□□□□□ -1.41
SHC1YER096W DSK2P48510 373 aa6.25□□□□□ -1.41
SHC1YER096W PUS4P48567 403 aaKnown RBP6.25□□□□□ -1.41
SHC1YER096W BNS1P50084 137 aa6.25□□□□□ -1.41
SHC1YER096W PAU10Q03050 120 aa6.25□□□□□ -1.41
SHC1YER096W RXT3Q07458 294 aa6.25□□□□□ -1.41
SHC1YER096W PAU20Q08322 120 aa6.25□□□□□ -1.41
SHC1YER096W PAU9Q3E770 120 aa6.25□□□□□ -1.41
SHC1YER096W YER145C-AA0A023PYF4 145 aa6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms