RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C DYN2Q02647 92 aa5.81□□□□□ -1.48
TDP1YBR223C ATC1Q04005 294 aa5.81□□□□□ -1.48
TDP1YBR223C FOL3Q12676 427 aaPredicted RBP5.81□□□□□ -1.48
TDP1YBR223C SEC62P21825 274 aa5.8□□□□□ -1.48
TDP1YBR223C YGL010WP25338 174 aa5.8□□□□□ -1.48
TDP1YBR223C RPS0AP32905 252 aaKnown RBP5.8□□□□□ -1.48
TDP1YBR223C YJR015WP47090 510 aa5.8□□□□□ -1.48
TDP1YBR223C NAT3Q06504 195 aa5.8□□□□□ -1.48
TDP1YBR223C YPS3Q12303 508 aa5.8□□□□□ -1.48
TDP1YBR223C RPL9AP05738 191 aaKnown RBP5.79□□□□□ -1.48
TDP1YBR223C GAR1P28007 205 aaKnown RBP5.79□□□□□ -1.48
TDP1YBR223C HMX1P32339 317 aa5.79□□□□□ -1.48
TDP1YBR223C YOX1P34161 385 aa5.79□□□□□ -1.48
TDP1YBR223C YMR262WP38430 313 aa5.79□□□□□ -1.48
TDP1YBR223C PSD1P39006 500 aa5.79□□□□□ -1.48
TDP1YBR223C DFG10P40526 253 aa5.79□□□□□ -1.48
TDP1YBR223C CRH1P53301 507 aa5.79□□□□□ -1.48
TDP1YBR223C RPL21AQ02753 160 aaKnown RBP5.79□□□□□ -1.48
TDP1YBR223C LOA1Q06508 300 aa5.79□□□□□ -1.48
TDP1YBR223C TMA17Q12513 150 aa5.79□□□□□ -1.48
TDP1YBR223C RPL21BQ12672 160 aaKnown RBP5.79□□□□□ -1.48
TDP1YBR223C YGL258W-AQ3E740 77 aa5.79□□□□□ -1.48
TDP1YBR223C YOS1Q3E834 85 aa5.79□□□□□ -1.48
TDP1YBR223C COA6Q3E846 104 aa5.79□□□□□ -1.48
TDP1YBR223C CPR5P35176 225 aa5.78□□□□□ -1.48
TDP1YBR223C YKL075CP36083 450 aa5.78□□□□□ -1.48
TDP1YBR223C MOH1P38191 138 aa5.78□□□□□ -1.48
TDP1YBR223C YGR149WP48236 432 aa5.78□□□□□ -1.48
TDP1YBR223C MIC27P50945 234 aa5.78□□□□□ -1.48
TDP1YBR223C RPL9BP51401 191 aaKnown RBP5.78□□□□□ -1.48
TDP1YBR223C BOR1P53838 576 aa5.78□□□□□ -1.48
TDP1YBR223C SHH3Q04487 196 aa5.78□□□□□ -1.48
TDP1YBR223C LDS2Q08218 356 aa5.78□□□□□ -1.48
TDP1YBR223C DCN1Q12395 269 aa5.78□□□□□ -1.48
TDP1YBR223C POM34Q12445 299 aa5.78□□□□□ -1.48
TDP1YBR223C DAD2P36162 133 aa5.77□□□□□ -1.48
TDP1YBR223C GPI2P46961 280 aa5.77□□□□□ -1.48
TDP1YBR223C STP4Q07351 490 aa5.77□□□□□ -1.48
TDP1YBR223C YIL134C-AQ45U18 67 aa5.77□□□□□ -1.48
TDP1YBR223C MRS3P10566 314 aa5.77□□□□□ -1.49
TDP1YBR223C PRE9P23638 258 aaKnown RBP5.77□□□□□ -1.49
TDP1YBR223C SCM4P32564 187 aa5.77□□□□□ -1.49
TDP1YBR223C MRPL11P36521 249 aaPredicted RBP5.77□□□□□ -1.49
TDP1YBR223C CYB5P40312 120 aa5.77□□□□□ -1.49
TDP1YBR223C OCA2P53949 197 aa5.77□□□□□ -1.49
TDP1YBR223C ACS1Q01574 713 aa5.77□□□□□ -1.49
TDP1YBR223C SMT3Q12306 101 aaKnown RBP5.77□□□□□ -1.49
TDP1YBR223C YPR071WQ12346 211 aa5.77□□□□□ -1.49
TDP1YBR223C PAA1Q12447 191 aaKnown RBP5.77□□□□□ -1.49
TDP1YBR223C YNR034W-AQ3E841 98 aa5.77□□□□□ -1.49
TDP1YBR223C IRA2P19158 3079 aa5.76□□□□□ -1.49
TDP1YBR223C TRP4P07285 380 aaPredicted RBP5.76□□□□□ -1.49
TDP1YBR223C RPS23AP0CX29 145 aaKnown RBP5.76□□□□□ -1.49
TDP1YBR223C RPS23BP0CX30 145 aa5.76□□□□□ -1.49
TDP1YBR223C MRPL44P19956 98 aa5.76□□□□□ -1.49
TDP1YBR223C RPS2P25443 254 aaKnown RBP5.76□□□□□ -1.49
TDP1YBR223C DSK2P48510 373 aa5.76□□□□□ -1.49
TDP1YBR223C RPN14P53196 417 aa5.76□□□□□ -1.49
TDP1YBR223C PIN2Q12057 282 aa5.76□□□□□ -1.49
TDP1YBR223C YMR316C-AI2HB70 103 aa5.75□□□□□ -1.49
TDP1YBR223C FUN14P18411 198 aa5.75□□□□□ -1.49
TDP1YBR223C RNA15P25299 296 aaPredicted RBP5.75□□□□□ -1.49
TDP1YBR223C YBR184WP38299 523 aa5.75□□□□□ -1.49
TDP1YBR223C PIC2P40035 300 aa5.75□□□□□ -1.49
TDP1YBR223C OST3P48439 350 aa5.75□□□□□ -1.49
TDP1YBR223C POS5Q06892 414 aa5.75□□□□□ -1.49
TDP1YBR223C YOR352WQ08816 343 aa5.75□□□□□ -1.49
TDP1YBR223C TOM40P23644 387 aaKnown RBP5.74□□□□□ -1.49
TDP1YBR223C PHD1P36093 366 aa5.74□□□□□ -1.49
TDP1YBR223C YIL163CP40448 117 aa5.74□□□□□ -1.49
TDP1YBR223C PIR5P46999 287 aa5.74□□□□□ -1.49
TDP1YBR223C DMA2P53924 522 aa5.74□□□□□ -1.49
TDP1YBR223C CRZ1P53968 678 aa5.74□□□□□ -1.49
TDP1YBR223C YHP1Q04116 353 aa5.74□□□□□ -1.49
TDP1YBR223C YOR105WQ08504 108 aa5.74□□□□□ -1.49
TDP1YBR223C GEP5Q12393 293 aa5.74□□□□□ -1.49
TDP1YBR223C RPL39P04650 51 aa5.74□□□□□ -1.49
TDP1YBR223C POR1P04840 283 aaKnown RBP5.74□□□□□ -1.49
TDP1YBR223C DFR1P07807 211 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
TDP1YBR223C NOP1P15646 327 aaKnown RBP5.74□□□□□ -1.49
TDP1YBR223C SUA7P29055 345 aaPredicted RBP5.74□□□□□ -1.49
TDP1YBR223C SPS18P32572 300 aa5.74□□□□□ -1.49
TDP1YBR223C YIL077CP40508 320 aa5.74□□□□□ -1.49
TDP1YBR223C SAS2P40963 338 aa5.74□□□□□ -1.49
TDP1YBR223C BNA2P47125 453 aa5.74□□□□□ -1.49
TDP1YBR223C SSU72P53538 206 aaPredicted RBP5.74□□□□□ -1.49
TDP1YBR223C GAT3Q07928 141 aa5.74□□□□□ -1.49
TDP1YBR223C RAD23P32628 398 aaKnown RBP5.73□□□□□ -1.49
TDP1YBR223C YBR220CP38318 560 aa5.73□□□□□ -1.49
TDP1YBR223C RPB11P38902 120 aa5.73□□□□□ -1.49
TDP1YBR223C ARR2Q06597 130 aa5.73□□□□□ -1.49
TDP1YBR223C MRL1Q06815 381 aa5.73□□□□□ -1.49
TDP1YBR223C MCH1Q07376 486 aa5.73□□□□□ -1.49
TDP1YBR223C YOL024WQ08172 172 aa5.73□□□□□ -1.49
TDP1YBR223C PIS1P06197 220 aaKnown RBP5.72□□□□□ -1.49
TDP1YBR223C ATP10P18496 279 aa5.72□□□□□ -1.49
TDP1YBR223C SRP14P38985 146 aa5.72□□□□□ -1.49
TDP1YBR223C YFL051CP43552 160 aa5.72□□□□□ -1.49
TDP1YBR223C YJL118WP47022 219 aa5.72□□□□□ -1.49
TDP1YBR223C ERF2Q06551 359 aa5.72□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms