RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 DSEQ9UL01 958 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 BARX2Q9UMQ3 279 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-230ENST00000641927 PCDHB8Q9UN66 801 aa18.66■□□□□ 0.58
PHGDH-230ENST00000641927 A8MXQ7 604 aa18.65■□□□□ 0.58
PHGDH-230ENST00000641927 CILPO75339 1184 aa18.65■□□□□ 0.58
PHGDH-230ENST00000641927 SKILP12757 684 aa18.65■□□□□ 0.58
PHGDH-230ENST00000641927 KLHL30Q0D2K2 578 aa18.65■□□□□ 0.58
PHGDH-230ENST00000641927 INCA1Q0VD86 236 aa18.65■□□□□ 0.58
PHGDH-230ENST00000641927 ELAVL2Q12926 359 aaKnown RBP18.65■□□□□ 0.58
PHGDH-230ENST00000641927 TDRD12Q587J7 1177 aaKnown RBP18.65■□□□□ 0.58
PHGDH-230ENST00000641927 LRRC8AQ8IWT6 810 aa18.65■□□□□ 0.58
PHGDH-230ENST00000641927 SP7Q8TDD2 431 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-230ENST00000641927 ACP6Q9NPH0 428 aa18.65■□□□□ 0.58
PHGDH-230ENST00000641927 CARNS1A5YM72 827 aa18.64■□□□□ 0.57
PHGDH-230ENST00000641927 PDGFRBP09619 1106 aa18.64■□□□□ 0.57
PHGDH-230ENST00000641927 TKTP29401 623 aaKnown RBP18.64■□□□□ 0.57
PHGDH-230ENST00000641927 PTK2Q05397 1052 aa18.64■□□□□ 0.57
PHGDH-230ENST00000641927 SLC47A2Q86VL8 602 aa18.64■□□□□ 0.57
PHGDH-230ENST00000641927 SLC39A11Q8N1S5 342 aa18.64■□□□□ 0.57
PHGDH-230ENST00000641927 BAG1Q99933 345 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-230ENST00000641927 NT5C1AQ9BXI3 368 aa18.64■□□□□ 0.57
PHGDH-230ENST00000641927 FAM124BQ9H5Z6 455 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-230ENST00000641927 DDX43Q9NXZ2 648 aaKnown RBP18.64■□□□□ 0.57
PHGDH-230ENST00000641927 HCRTO43612 131 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 CALCAP01258 141 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 WARSP23381 471 aaKnown RBP18.63■□□□□ 0.57
PHGDH-230ENST00000641927 LMO2P25791 158 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 CLCN1P35523 988 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 PPM1AP35813 382 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 BPIFB4P59827 614 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 YWHAHQ04917 246 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-230ENST00000641927 OVOS1Q6IE37 1185 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 WDR59Q6PJI9 974 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 LIMS2Q7Z4I7 341 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 IRF2BP2Q7Z5L9 587 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 OSTM1Q86WC4 334 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 CLP1Q92989 425 aaKnown RBP18.63■□□□□ 0.57
PHGDH-230ENST00000641927 TMEM176AQ96HP8 235 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 B3GALT6Q96L58 329 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 TWNKQ96RR1 684 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 ELOVL4Q9GZR5 314 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 CNTN6Q9UQ52 1028 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 STXBP5LQ9Y2K9 1186 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 RANBP2P49792 3224 aaKnown RBP18.63■□□□□ 0.57
PHGDH-230ENST00000641927 LINC01553A4QN01 128 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 SYN3O14994 580 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 NRDCO43847 1150 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 CYP11A1P05108 521 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 SERPING1P05155 500 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 CA3P07451 260 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 CD19P15391 556 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 TYMPP19971 482 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 ACAT1P24752 427 aaKnown RBP18.63■□□□□ 0.57
PHGDH-230ENST00000641927 HNRNPH3P31942 346 aaKnown RBP18.63■□□□□ 0.57
PHGDH-230ENST00000641927 CTNNB1P35222 781 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 LHX1P48742 406 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 PDE6CP51160 858 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 RAD23BP54727 409 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 MLLT1Q03111 559 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-230ENST00000641927 ACOT1Q86TX2 421 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 UNC93AQ86WB7 457 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 THEM5Q8N1Q8 247 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 WHAMMQ8TF30 809 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 HEXIM2Q96MH2 286 aaKnown RBP18.63■□□□□ 0.57
PHGDH-230ENST00000641927 ZNF830Q96NB3 372 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-230ENST00000641927 DNAI2Q9GZS0 605 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 HAUS4Q9H6D7 363 aa18.63■□□□□ 0.57
PHGDH-230ENST00000641927 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-230ENST00000641927 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-230ENST00000641927 PLEKP08567 350 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-230ENST00000641927 FAM163BP0C2L3 166 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 CYP11B1P15538 503 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 GNA15P30679 374 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 BMP8BP34820 402 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 ZNF132P52740 706 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 KRT17Q04695 432 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 MEA1Q16626 185 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 TAF3Q5VWG9 929 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 KIAA1841Q6NSI8 718 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 CYP26C1Q6V0L0 522 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 TDHQ8IZJ6 230 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 SLC4A11Q8NBS3 891 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 CHP1Q99653 195 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 DPEP3Q9H4B8 488 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 DEF6Q9H4E7 631 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 MTUS1Q9ULD2 1270 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 NME7Q9Y5B8 376 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 PCDHA11Q9Y5I1 949 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 BZW2Q9Y6E2 419 aaKnown RBP18.62■□□□□ 0.57
PHGDH-230ENST00000641927 KIAA1671Q9BY89 1806 aa18.62■□□□□ 0.57
PHGDH-230ENST00000641927 GABRDO14764 452 aa18.61■□□□□ 0.57
PHGDH-230ENST00000641927 THAP12O43422 761 aa18.61■□□□□ 0.57
PHGDH-230ENST00000641927 FGF18O76093 207 aa18.61■□□□□ 0.57
PHGDH-230ENST00000641927 LINC00271P0C7V0 271 aa18.61■□□□□ 0.57
PHGDH-230ENST00000641927 PBX2P40425 430 aa18.61■□□□□ 0.57
PHGDH-230ENST00000641927 PSMC1P62191 440 aaKnown RBP18.61■□□□□ 0.57
PHGDH-230ENST00000641927 VARS2Q5ST30 1063 aaKnown RBP18.61■□□□□ 0.57
PHGDH-230ENST00000641927 HGSNATQ68CP4 663 aa18.61■□□□□ 0.57
PHGDH-230ENST00000641927 CHRDL2Q6WN34 429 aa18.61■□□□□ 0.57
PHGDH-230ENST00000641927 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms