RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 LMBRD2Q68DH5 695 aaPredicted RBP10.13□□□□□ -0.79
PHGDH-228ENST00000641847 PHLDB3Q6NSJ2 640 aa10.13□□□□□ -0.79
PHGDH-228ENST00000641847 WDR49Q8IV35 697 aa10.13□□□□□ -0.79
PHGDH-228ENST00000641847 EFCAB13Q8IY85 973 aa10.13□□□□□ -0.79
PHGDH-228ENST00000641847 RNF169Q8NCN4 708 aa10.13□□□□□ -0.79
PHGDH-228ENST00000641847 PARD3BQ8TEW8 1205 aa10.13□□□□□ -0.79
PHGDH-228ENST00000641847 LPPQ93052 612 aa10.13□□□□□ -0.79
PHGDH-228ENST00000641847 NXPE3Q969Y0 559 aa10.13□□□□□ -0.79
PHGDH-228ENST00000641847 PGBD4Q96DM1 585 aa10.13□□□□□ -0.79
PHGDH-228ENST00000641847 SHDQ96IW2 340 aa10.13□□□□□ -0.79
PHGDH-228ENST00000641847 FAM84AQ96KN4 292 aa10.13□□□□□ -0.79
PHGDH-228ENST00000641847 NAP1L5Q96NT1 182 aaPredicted RBP10.13□□□□□ -0.79
PHGDH-228ENST00000641847 NDST4Q9H3R1 872 aa10.13□□□□□ -0.79
PHGDH-228ENST00000641847 TBC1D17Q9HA65 648 aa10.13□□□□□ -0.79
PHGDH-228ENST00000641847 INTS13Q9NVM9 706 aa10.13□□□□□ -0.79
PHGDH-228ENST00000641847 PARP2Q9UGN5 583 aa10.13□□□□□ -0.79
PHGDH-228ENST00000641847 FAM208BQ5VWN6 2430 aa10.13□□□□□ -0.79
PHGDH-228ENST00000641847 A0A0U1RQF3 1178 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 TTC26A0AVF1 554 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 MEIS3P2A8K0S8 358 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 LACTBL1A8MY62 500 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 TEX33O43247 280 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 N4BP1O75113 896 aaKnown RBP10.12□□□□□ -0.79
PHGDH-228ENST00000641847 ZNF623O75123 536 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 ADCY5O95622 1261 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 DCNP07585 359 aaKnown RBP10.12□□□□□ -0.79
PHGDH-228ENST00000641847 ADRB1P08588 477 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 NFICP08651 508 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 TNNI1P19237 187 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 GTF2H1P32780 548 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 MLH1P40692 756 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 GCLMP48507 274 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 FMO5P49326 533 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 MXI1P50539 228 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 CLDN10P78369 228 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 FAM189BP81408 668 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 UBXN1Q04323 297 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 PPP3CAQ08209 521 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 TMEM132DQ14C87 1099 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 SLC10A6Q3KNW5 377 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 CBWD6Q4V339 395 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 CBWD3Q5JTY5 395 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 CBWD5Q5RIA9 395 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 FKBP15Q5T1M5 1219 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 JADE1Q6IE81 842 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 MRPL10Q7Z7H8 261 aaKnown RBP10.12□□□□□ -0.79
PHGDH-228ENST00000641847 GPR149Q86SP6 731 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 ZNF598Q86UK7 904 aaKnown RBP10.12□□□□□ -0.79
PHGDH-228ENST00000641847 ECHDC2Q86YB7 292 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 CD302Q8IX05 232 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 SUMF1Q8NBK3 374 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 MRPL9Q9BYD2 267 aaKnown RBP10.12□□□□□ -0.79
PHGDH-228ENST00000641847 MTMR12Q9C0I1 747 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 PLEKHA5Q9HAU0 1116 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 KLK14Q9P0G3 267 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 CNTN3Q9P232 1028 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 HCSTQ9UBK5 93 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 STK39Q9UEW8 545 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 DPP7Q9UHL4 492 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 CA14Q9ULX7 337 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 USP18Q9UMW8 372 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 GPR179Q6PRD1 2367 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 PLXNA4Q9HCM2 1894 aa10.12□□□□□ -0.79
PHGDH-228ENST00000641847 TMEM191BP0C7N4 346 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 SRFP11831 508 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 GBP2P32456 591 aaPredicted RBP10.11□□□□□ -0.79
PHGDH-228ENST00000641847 PBX3P40426 434 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 VASPP50552 380 aaPredicted RBP10.11□□□□□ -0.79
PHGDH-228ENST00000641847 MCCD1P59942 119 aaPredicted RBP10.11□□□□□ -0.79
PHGDH-228ENST00000641847 TFAMQ00059 246 aaKnown RBP10.11□□□□□ -0.79
PHGDH-228ENST00000641847 BIRC3Q13489 604 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 NR1I3Q14994 352 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 ZNF528Q3MIS6 628 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 GLRA4Q5JXX5 417 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 AGMOQ6ZNB7 445 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 C15orf39Q6ZRI6 1047 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 VPS52Q8N1B4 723 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 OR5B17Q8NGF7 314 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 RSPH1Q8WYR4 309 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 KIF12Q96FN5 646 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 MRFAP1L1Q96HT8 127 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 ANKRD36BP1Q96IX9 119 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 ZFP42Q96MM3 310 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 RPS6KC1Q96S38 1066 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 EMILIN2Q9BXX0 1053 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 BCO2Q9BYV7 579 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 CXCL16Q9H2A7 254 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 ASB7Q9H672 318 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 RSAD1Q9HA92 442 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 TMEM8AQ9HCN3 771 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 UBN1Q9NPG3 1134 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 GCNT4Q9P109 453 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 FBXO4Q9UKT5 387 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 GIT1Q9Y2X7 761 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 C2CD2Q9Y426 696 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 PCDHGA2Q9Y5H1 932 aa10.11□□□□□ -0.79
PHGDH-228ENST00000641847 KIAA1671Q9BY89 1806 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 DCDC2BA2VCK2 349 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 KRBA1A5PL33 1030 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 P4HA2O15460 535 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms