RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 NFIL3Q16649 462 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 SOWAHAQ2M3V2 549 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 SLC39A12Q504Y0 691 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 GET4Q7L5D6 327 aaPredicted RBP18.61■□□□□ 0.57
PHGDH-227ENST00000641811 OTOP3Q7RTS5 596 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 LRRTM3Q86VH5 581 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 OSTM1Q86WC4 334 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 THEM5Q8N1Q8 247 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 TTC9BQ8N6N2 239 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 ELMO3Q96BJ8 720 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 ACSF2Q96CM8 615 aaPredicted RBP18.61■□□□□ 0.57
PHGDH-227ENST00000641811 MYADMQ96S97 322 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 ZCWPW1Q9H0M4 648 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 SLC27A5Q9Y2P5 690 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 MTMR11A4FU01 709 aa18.6■□□□□ 0.57
PHGDH-227ENST00000641811 BIN1O00499 593 aa18.6■□□□□ 0.57
PHGDH-227ENST00000641811 PHACTR2O75167 634 aa18.6■□□□□ 0.57
PHGDH-227ENST00000641811 ASGR2P07307 311 aa18.6■□□□□ 0.57
PHGDH-227ENST00000641811 FSHRP23945 695 aa18.6■□□□□ 0.57
PHGDH-227ENST00000641811 PMS1P54277 932 aaKnown RBP18.6■□□□□ 0.57
PHGDH-227ENST00000641811 MYL6P60660 151 aa18.6■□□□□ 0.57
PHGDH-227ENST00000641811 CLDN10P78369 228 aa18.6■□□□□ 0.57
PHGDH-227ENST00000641811 TWF1Q12792 350 aa18.6■□□□□ 0.57
PHGDH-227ENST00000641811 C1orf220Q5T0J3 134 aa18.6■□□□□ 0.57
PHGDH-227ENST00000641811 TDRD10Q5VZ19 366 aaKnown RBP18.6■□□□□ 0.57
PHGDH-227ENST00000641811 CENPPQ6IPU0 288 aa18.6■□□□□ 0.57
PHGDH-227ENST00000641811 RTL10Q7L3V2 364 aa18.6■□□□□ 0.57
PHGDH-227ENST00000641811 ZDHHC14Q8IZN3 488 aa18.6■□□□□ 0.57
PHGDH-227ENST00000641811 ADSSL1Q8N142 457 aa18.6■□□□□ 0.57
PHGDH-227ENST00000641811 TMC2Q8TDI7 906 aa18.6■□□□□ 0.57
PHGDH-227ENST00000641811 IPO9Q96P70 1041 aaKnown RBP18.6■□□□□ 0.57
PHGDH-227ENST00000641811 FAM86C2PA6NEL3 165 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 SOAT2O75908 522 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 VNN1O95497 513 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 C4BPAP04003 597 aaKnown RBP18.59■□□□□ 0.57
PHGDH-227ENST00000641811 POU2F2P09086 479 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 ALADP13716 330 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 CD44P16070 742 aaKnown RBP18.59■□□□□ 0.57
PHGDH-227ENST00000641811 BMP6P22004 513 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 ACAT1P24752 427 aaKnown RBP18.59■□□□□ 0.57
PHGDH-227ENST00000641811 RPL13P26373 211 aaKnown RBP18.59■□□□□ 0.57
PHGDH-227ENST00000641811 BIRC3Q13489 604 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 TRPC3Q13507 836 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 CAMK4Q16566 473 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 EDRF1Q3B7T1 1238 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 COBLL1Q53SF7 1204 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 ANKRD40Q6AI12 368 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 LIMS2Q7Z4I7 341 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 FAM186BQ8IYM0 893 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 ADGRF2Q8IZF7 708 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 TMEM86AQ8N2M4 240 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 PLCD3Q8N3E9 789 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 TOP6BLQ8N6T0 577 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 ST13P5Q8NFI4 369 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-227ENST00000641811 ITFG1Q8TB96 612 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 CORO1BQ9BR76 489 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 TMLHEQ9NVH6 421 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 DDX43Q9NXZ2 648 aaKnown RBP18.59■□□□□ 0.57
PHGDH-227ENST00000641811 CEP72Q9P209 647 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 MAFFQ9ULX9 164 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 YIPF1Q9Y548 306 aa18.59■□□□□ 0.57
PHGDH-227ENST00000641811 TRIOO75962 3097 aa18.58■□□□□ 0.57
PHGDH-227ENST00000641811 TRIM49BA6NDI0 452 aa18.58■□□□□ 0.56
PHGDH-227ENST00000641811 RHOP08100 348 aa18.58■□□□□ 0.56
PHGDH-227ENST00000641811 TRIM49P0CI25 452 aa18.58■□□□□ 0.56
PHGDH-227ENST00000641811 TRIM49CP0CI26 452 aa18.58■□□□□ 0.56
PHGDH-227ENST00000641811 PSMC2P35998 433 aaKnown RBP18.58■□□□□ 0.56
PHGDH-227ENST00000641811 VAMP7P51809 220 aa18.58■□□□□ 0.56
PHGDH-227ENST00000641811 CCDC142Q17RM4 750 aa18.58■□□□□ 0.56
PHGDH-227ENST00000641811 PABPC1LQ4VXU2 614 aaKnown RBP18.58■□□□□ 0.56
PHGDH-227ENST00000641811 HS6ST3Q8IZP7 471 aa18.58■□□□□ 0.56
PHGDH-227ENST00000641811 KBTBD7Q8WVZ9 684 aa18.58■□□□□ 0.56
PHGDH-227ENST00000641811 MMS19Q96T76 1030 aa18.58■□□□□ 0.56
PHGDH-227ENST00000641811 XYLT2Q9H1B5 865 aa18.58■□□□□ 0.56
PHGDH-227ENST00000641811 GABRDO14764 452 aa18.57■□□□□ 0.56
PHGDH-227ENST00000641811 MAPK13O15264 365 aa18.57■□□□□ 0.56
PHGDH-227ENST00000641811 PTPN2P17706 415 aa18.57■□□□□ 0.56
PHGDH-227ENST00000641811 AP3M2P53677 418 aa18.57■□□□□ 0.56
PHGDH-227ENST00000641811 NCOA4Q13772 614 aa18.57■□□□□ 0.56
PHGDH-227ENST00000641811 MORC3Q14149 939 aa18.57■□□□□ 0.56
PHGDH-227ENST00000641811 PTPN21Q16825 1174 aa18.57■□□□□ 0.56
PHGDH-227ENST00000641811 SLC5A9Q2M3M2 681 aa18.57■□□□□ 0.56
PHGDH-227ENST00000641811 WDR72Q3MJ13 1102 aa18.57■□□□□ 0.56
PHGDH-227ENST00000641811 CLEC17AQ6ZS10 378 aa18.57■□□□□ 0.56
PHGDH-227ENST00000641811 SV2AQ7L0J3 742 aa18.57■□□□□ 0.56
PHGDH-227ENST00000641811 ING5Q8WYH8 240 aa18.57■□□□□ 0.56
PHGDH-227ENST00000641811 SMOC2Q9H3U7 446 aa18.57■□□□□ 0.56
PHGDH-227ENST00000641811 C11orf16Q9NQ32 467 aa18.57■□□□□ 0.56
PHGDH-227ENST00000641811 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.57■□□□□ 0.56
PHGDH-227ENST00000641811 NXF1Q9UBU9 619 aaKnown RBP18.57■□□□□ 0.56
PHGDH-227ENST00000641811 NOTCH4Q99466 2003 aa18.57■□□□□ 0.56
PHGDH-227ENST00000641811 NRG2O14511 850 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-227ENST00000641811 CETN3O15182 167 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 ATP2C2O75185 946 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 PDGFRBP09619 1106 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 LAMP2P13473 410 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 KRT13P13646 458 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 LMO2P25791 158 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 GCLMP48507 274 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 LHX1P48742 406 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms