RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	KRT79	Q5XKE5	535 aa		10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	HAUS3	Q68CZ6	603 aa		10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	MPZL3	Q6UWV2	235 aa		10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	MAMSTR	Q6ZN01	415 aa		10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	USP49	Q70CQ1	688 aa		10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	KCNK18	Q7Z418	384 aa		10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	PDILT	Q8N807	584 aa		10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	IGSF22	Q8N9C0	903 aa		10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	EPSTI1	Q96J88	318 aa		10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	TCHP	Q9BT92	498 aa		10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	IER2	Q9BTL4	223 aa		10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	MKNK1	Q9BUB5	465 aa		10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	TRPV4	Q9HBA0	871 aa		10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	KMT5A	Q9NQR1	393 aa		10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	PCDHB8	Q9UN66	801 aa		10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	CNOT1	A5YKK6	2376 aa	Known RBP	10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	NUP210	Q8TEM1	1887 aa	Predicted RBP	10.89	□□□□□ -0.67
PHGDH-222	ENST00000641587	USP24	Q9UPU5	2620 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	TSC2	P49815	1807 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	MYH11	P35749	1972 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	FRY	Q5TBA9	3013 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	GREB1	Q4ZG55	1949 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	SPECC1L-ADORA2A	F8WAN1	911 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	CXCL8	P10145	99 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	MCF2	P10911	925 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	CTH	P32929	405 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	RPL9	P32969	192 aa	Known RBP	10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	STAT6	P42226	847 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	PXN	P49023	591 aa	Predicted RBP	10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	KPNA1	P52294	538 aa	Predicted RBP	10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	TNK2	Q07912	1038 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	RAD51AP2	Q09MP3	1159 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	DUSP4	Q13115	394 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	DMP1	Q13316	513 aa	Predicted RBP	10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	PDIA5	Q14554	519 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	KARS	Q15046	597 aa	Known RBP	10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	PON2	Q15165	354 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	SF3A2	Q15428	464 aa	Known RBP	10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	KLHL40	Q2TBA0	621 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	CAVIN1	Q6NZI2	390 aa	Known RBP	10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	PKN3	Q6P5Z2	889 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	ARID3B	Q8IVW6	561 aa	Predicted RBP	10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	YAF2	Q8IY57	180 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	SPEM1	Q8N4L4	309 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	FAM160A2	Q8N612	972 aa	Predicted RBP	10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	BEST2	Q8NFU1	509 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	CSGALNACT1	Q8TDX6	532 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	SYAP1	Q96A49	352 aa	Predicted RBP	10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	DHX58	Q96C10	678 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	CALML4	Q96GE6	196 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	TMEM209	Q96SK2	561 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	PLIN2	Q99541	437 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	PANK2	Q9BZ23	570 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	HAPLN2	Q9GZV7	340 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	TMEM134	Q9H6X4	195 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	RXFP3	Q9NSD7	469 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	GTSE1	Q9NYZ3	720 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	CCDC39	Q9UFE4	941 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	RALY	Q9UKM9	306 aa	Known RBP	10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	SLC27A5	Q9Y2P5	690 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	SPAG17	Q6Q759	2223 aa		10.88	□□□□□ -0.67
PHGDH-222	ENST00000641587	EML5	Q05BV3	1969 aa		10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	PPEF2	O14830	753 aa		10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	CHAD	O15335	359 aa		10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	POLR2D	O15514	142 aa	Known RBP	10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	LRP3	O75074	770 aa		10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	PRAMEF12	O95522	483 aa		10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	MUT	P22033	750 aa		10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	YWHAH	Q04917	246 aa	Predicted RBP	10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	FCHO2	Q0JRZ9	810 aa		10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	CSRP2	Q16527	193 aa		10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	RINT1	Q6NUQ1	792 aa		10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	GAREM2	Q75VX8	874 aa		10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	LONP2	Q86WA8	852 aa		10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	CEP57L1	Q8IYX8	460 aa		10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	LEMD2	Q8NC56	503 aa		10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	APPL2	Q8NEU8	664 aa		10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	PYM1	Q9BRP8	204 aa	Known RBP	10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	CCSER1	Q9C0I3	900 aa		10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	SMOC1	Q9H4F8	434 aa		10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	POLR3B	Q9NW08	1133 aa	Predicted RBP	10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	STK24	Q9Y6E0	443 aa		10.87	□□□□□ -0.67
PHGDH-222	ENST00000641587	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	MYBPHL	A2RUH7	354 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	MTMR11	A4FU01	709 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587		M0QZQ0	153 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	AXIN1	O15169	862 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	EXTL3	O43909	919 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	ZNF202	O95125	648 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	PLCG1	P19174	1290 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	TNFSF9	P41273	254 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	CYP4F8	P98187	520 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	LRRC32	Q14392	662 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	RRAGB	Q5VZM2	374 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	C1orf186	Q6ZWK4	172 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	CEP68	Q76N32	757 aa		10.86	□□□□□ -0.67
PHGDH-222	ENST00000641587	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.86	□□□□□ -0.67

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