RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 DEF6Q9H4E7 631 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 APOBEC3GQ9HC16 384 aaKnown RBP13.83□□□□□ -0.2
PHGDH-220ENST00000641570 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.83□□□□□ -0.2
PHGDH-220ENST00000641570 CISHQ9NSE2 258 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 SEPT11Q9NVA2 429 aaKnown RBP13.83□□□□□ -0.2
PHGDH-220ENST00000641570 DDX43Q9NXZ2 648 aaKnown RBP13.83□□□□□ -0.2
PHGDH-220ENST00000641570 MYO6Q9UM54 1294 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 BARX2Q9UMQ3 279 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-220ENST00000641570 CEP83Q9Y592 693 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 OR6C75A6NL08 312 aa13.82□□□□□ -0.2
PHGDH-220ENST00000641570 M0QZQ0 153 aa13.82□□□□□ -0.2
PHGDH-220ENST00000641570 FERP16591 822 aa13.82□□□□□ -0.2
PHGDH-220ENST00000641570 WARSP23381 471 aaKnown RBP13.82□□□□□ -0.2
PHGDH-220ENST00000641570 TKTP29401 623 aaKnown RBP13.82□□□□□ -0.2
PHGDH-220ENST00000641570 PLCB3Q01970 1234 aa13.82□□□□□ -0.2
PHGDH-220ENST00000641570 ARID5AQ03989 594 aa13.82□□□□□ -0.2
PHGDH-220ENST00000641570 GPM6BQ13491 265 aa13.82□□□□□ -0.2
PHGDH-220ENST00000641570 SMC1AQ14683 1233 aaKnown RBP13.82□□□□□ -0.2
PHGDH-220ENST00000641570 DRAP1Q14919 205 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-220ENST00000641570 ZNF394Q53GI3 561 aa13.82□□□□□ -0.2
PHGDH-220ENST00000641570 WSCD1Q658N2 575 aa13.82□□□□□ -0.2
PHGDH-220ENST00000641570 FAM109BQ6ICB4 259 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-220ENST00000641570 PHLDB3Q6NSJ2 640 aa13.82□□□□□ -0.2
PHGDH-220ENST00000641570 GJB7Q6PEY0 223 aa13.82□□□□□ -0.2
PHGDH-220ENST00000641570 RBBP8NLQ8NC74 664 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-220ENST00000641570 C3orf58Q8NDZ4 430 aa13.82□□□□□ -0.2
PHGDH-220ENST00000641570 HEXIM2Q96MH2 286 aaKnown RBP13.82□□□□□ -0.2
PHGDH-220ENST00000641570 C17orf80Q9BSJ5 609 aa13.82□□□□□ -0.2
PHGDH-220ENST00000641570 MED10Q9BTT4 135 aa13.82□□□□□ -0.2
PHGDH-220ENST00000641570 BCO2Q9BYV7 579 aa13.82□□□□□ -0.2
PHGDH-220ENST00000641570 MARCH5Q9NX47 278 aa13.82□□□□□ -0.2
PHGDH-220ENST00000641570 L1RE1Q9UN81 338 aa13.82□□□□□ -0.2
PHGDH-220ENST00000641570 LZTS1Q9Y250 596 aa13.82□□□□□ -0.2
PHGDH-220ENST00000641570 TIMM13Q9Y5L4 95 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-220ENST00000641570 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-220ENST00000641570 F8VZ95 297 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 SPTLC1O15269 473 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 B4GALT3O60512 393 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 IPO7O95373 1038 aaKnown RBP13.81□□□□□ -0.2
PHGDH-220ENST00000641570 ITGB1P05556 798 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 CASP14P31944 242 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 KRT9P35527 623 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 SOX5P35711 763 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 PBX2P40425 430 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 AARSP49588 968 aaKnown RBP eCLIP13.81□□□□□ -0.2
PHGDH-220ENST00000641570 ARPP19P56211 112 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 ERVK-21P61565 698 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 CCDC173Q0VFZ6 552 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 PSMD5Q16401 504 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 SOWAHAQ2M3V2 549 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 VARS2Q5ST30 1063 aaKnown RBP13.81□□□□□ -0.2
PHGDH-220ENST00000641570 SMYD5Q6GMV2 418 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 PDE12Q6L8Q7 609 aaKnown RBP13.81□□□□□ -0.2
PHGDH-220ENST00000641570 C4orf50Q6ZRC1 276 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 LMO3Q8TAP4 145 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 ELMO3Q96BJ8 720 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 ARID3AQ99856 593 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 TCF25Q9BQ70 676 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 GANQ9H2C0 597 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 NGRNQ9NPE2 291 aaKnown RBP13.81□□□□□ -0.2
PHGDH-220ENST00000641570 TLR9Q9NR96 1032 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 HESX1Q9UBX0 185 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 CDH9Q9ULB4 789 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 CAPN11Q9UMQ6 739 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 YBX2Q9Y2T7 364 aaKnown RBP13.81□□□□□ -0.2
PHGDH-220ENST00000641570 COL4A6Q14031 1691 aa13.81□□□□□ -0.2
PHGDH-220ENST00000641570 TDRD15B5MCY1 1934 aaKnown RBP13.8□□□□□ -0.2
PHGDH-220ENST00000641570 LRRC53A6NM62 1247 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 F8W810 466 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 THAP12O43422 761 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 GFPT2O94808 682 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 CYP11A1P05108 521 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 PDGFRBP09619 1106 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 GNA15P30679 374 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 ELF1P32519 619 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 PBX1P40424 430 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 NDST1P52848 882 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 CDH8P55286 799 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 APBA1Q02410 837 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 TAP1Q03518 808 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 KLHL30Q0D2K2 578 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 STILQ15468 1287 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 SGO2Q562F6 1265 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 PLPP4Q5VZY2 271 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 SPATA2LQ8IUW3 424 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-220ENST00000641570 TMEM130Q8N3G9 435 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 MSANTD4Q8NCY6 345 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 OR8K1Q8NGG5 319 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 CXorf38Q8TB03 319 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 POF1BQ8WVV4 589 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 TMEM176AQ96HP8 235 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 SYT15Q9BQS2 421 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 MRPL45Q9BRJ2 306 aaKnown RBP13.8□□□□□ -0.2
PHGDH-220ENST00000641570 GPR62Q9BZJ7 368 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 CERS4Q9HA82 394 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 SIX2Q9NPC8 291 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 KIAA1257Q9ULG3 409 aa13.8□□□□□ -0.2
PHGDH-220ENST00000641570 BZW2Q9Y6E2 419 aaKnown RBP13.8□□□□□ -0.2
PHGDH-220ENST00000641570 C5orf67F2Z3F1 127 aa13.79□□□□□ -0.2
PHGDH-220ENST00000641570 AP5Z1O43299 807 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 668.1 ms