RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 FAM221BA6H8Z2 402 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 OTOL1A6NHN0 477 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-217ENST00000641455 M0R2N6 131 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 CPLX1O14810 134 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 LYPLA2O95372 231 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 DEXIO95424 95 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 CAPNS1P04632 268 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 EDN1P05305 212 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 HARSP12081 509 aaKnown RBP8.57□□□□□ -1.04
PHGDH-217ENST00000641455 CDC25CP30307 473 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 RPL9P32969 192 aaKnown RBP8.57□□□□□ -1.04
PHGDH-217ENST00000641455 AVPR1AP37288 418 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 VEPH1Q14D04 833 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 ZNF568Q3ZCX4 644 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 LMBRD2Q68DH5 695 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-217ENST00000641455 NAIF1Q69YI7 327 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-217ENST00000641455 GALNT17Q6IS24 598 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 PIK3AP1Q6ZUJ8 805 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 SYT12Q8IV01 421 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 TMEFF1Q8IYR6 380 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 CEP120Q8N960 986 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 BSNDQ8WZ55 320 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 CD101Q93033 1021 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 PSMG2Q969U7 264 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 C18orf25Q96B23 403 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-217ENST00000641455 SPACA7Q96KW9 195 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 JAKMIP1Q96N16 626 aaKnown RBP8.57□□□□□ -1.04
PHGDH-217ENST00000641455 AIFM3Q96NN9 605 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 SEPT5Q99719 369 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-217ENST00000641455 NAP1L4Q99733 375 aaKnown RBP8.57□□□□□ -1.04
PHGDH-217ENST00000641455 LPIN3Q9BQK8 851 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 CCDC113Q9H0I3 377 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 CRISPLD1Q9H336 500 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 MBD1Q9UIS9 605 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-217ENST00000641455 PCDHB8Q9UN66 801 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 KCNJ14Q9UNX9 436 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 ASB3Q9Y575 518 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 TIMM13Q9Y5L4 95 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-217ENST00000641455 ITPR1Q14643 2758 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 APC2O95996 2303 aa8.57□□□□□ -1.04
PHGDH-217ENST00000641455 CITO14578 2027 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 ALDH1A2O94788 518 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 VNN2O95498 520 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 GJA4P35212 333 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 GRM5P41594 1212 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 NAMPTP43490 491 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 SEC13P55735 322 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 GFPT1Q06210 699 aaPredicted RBP8.56□□□□□ -1.04
PHGDH-217ENST00000641455 HNRNPDQ14103 355 aaKnown RBP8.56□□□□□ -1.04
PHGDH-217ENST00000641455 PPP2R5AQ15172 486 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 C2orf27AQ580R0 203 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 NT5DC1Q5TFE4 455 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 LYSMD4Q5XG99 296 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 BLOC1S2Q6QNY1 142 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 CPA6Q8N4T0 437 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 CCDC33Q8N5R6 958 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 TTC9BQ8N6N2 239 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 PNPLA1Q8N8W4 532 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 ATAD1Q8NBU5 361 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 BEST2Q8NFU1 509 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 RLN3Q8WXF3 142 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 IFT74Q96LB3 600 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 CNOT6LQ96LI5 555 aaKnown RBP8.56□□□□□ -1.04
PHGDH-217ENST00000641455 ZMAT2Q96NC0 199 aaKnown RBP8.56□□□□□ -1.04
PHGDH-217ENST00000641455 NACC1Q96RE7 527 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 FAM83CQ9BQN1 747 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 SCUBE2Q9NQ36 999 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 BCCIPQ9P287 314 aaKnown RBP eCLIP8.56□□□□□ -1.04
PHGDH-217ENST00000641455 PCDHA12Q9UN75 941 aa8.56□□□□□ -1.04
PHGDH-217ENST00000641455 URB1O60287 2271 aaKnown RBP8.56□□□□□ -1.04
PHGDH-217ENST00000641455 MYO16Q9Y6X6 1858 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 KIAA1549LQ6ZVL6 1849 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 WDFY3Q8IZQ1 3526 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 MTMR11A4FU01 709 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 OR6C75A6NL08 312 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 UPK3BL1B0FP48 263 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 UPK3BL2E5RIL1 263 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 TNFRSF10BO14763 440 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 FTH1P19P0C7X4 201 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 HSPA4P34932 840 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 DPP6P42658 865 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 PTGER3P43115 390 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 IFNAR2P48551 515 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 CDR1P51861 262 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 EFNA5P52803 228 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 GPR17Q13304 367 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 PDGFRLQ15198 375 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 TRIP6Q15654 476 aaKnown RBP8.55□□□□□ -1.04
PHGDH-217ENST00000641455 NPY5RQ15761 445 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 CALCRLQ16602 461 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 MGAT5BQ3V5L5 792 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 CENPPQ6IPU0 288 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 ARMCX5Q6P1M9 558 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 DSTYKQ6XUX3 929 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 RASSF3Q86WH2 238 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 CMTM8Q8IZV2 173 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 MINDY1Q8N5J2 469 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 MAB21L3Q8N8X9 362 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 MDGA1Q8NFP4 955 aa8.55□□□□□ -1.04
PHGDH-217ENST00000641455 OR2I1PQ8NGU4 316 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms