RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 SLC4A11Q8NBS3 891 aa18.35■□□□□ 0.53
PHGDH-208ENST00000641023 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-208ENST00000641023 WHAMMQ8TF30 809 aa18.35■□□□□ 0.53
PHGDH-208ENST00000641023 APOL6Q9BWW8 343 aa18.35■□□□□ 0.53
PHGDH-208ENST00000641023 PARP2Q9UGN5 583 aa18.35■□□□□ 0.53
PHGDH-208ENST00000641023 GOLGA6L10A0A0M3HER8 536 aa18.35■□□□□ 0.53
PHGDH-208ENST00000641023 SPDYE4A6NLX3 237 aa18.35■□□□□ 0.53
PHGDH-208ENST00000641023 MYCNP04198 464 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-208ENST00000641023 ATF7P17544 494 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-208ENST00000641023 CCND3P30281 292 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-208ENST00000641023 MRPS25P82663 173 aaKnown RBP18.35■□□□□ 0.53
PHGDH-208ENST00000641023 INCA1Q0VD86 236 aa18.35■□□□□ 0.53
PHGDH-208ENST00000641023 ZNF211Q13398 564 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-208ENST00000641023 LRRC52Q8N7C0 313 aa18.35■□□□□ 0.53
PHGDH-208ENST00000641023 CFHR5Q9BXR6 569 aa18.35■□□□□ 0.53
PHGDH-208ENST00000641023 STRIP2Q9ULQ0 834 aa18.35■□□□□ 0.53
PHGDH-208ENST00000641023 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.35■□□□□ 0.53
PHGDH-208ENST00000641023 TRPV2Q9Y5S1 764 aa18.35■□□□□ 0.53
PHGDH-208ENST00000641023 SCN10AQ9Y5Y9 1956 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 SART1O43290 800 aaKnown RBP18.34■□□□□ 0.53
PHGDH-208ENST00000641023 CD4P01730 458 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 ELNP15502 786 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 HSPA6P17066 643 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 MARCKSL1P49006 195 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 KCNA10Q16322 511 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 GLRA4Q5JXX5 417 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 UBXN11Q5T124 520 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 TWF2Q6IBS0 349 aaKnown RBP18.34■□□□□ 0.53
PHGDH-208ENST00000641023 LLGL2Q6P1M3 1020 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 FAM228AQ86W67 206 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 WDTC1Q8N5D0 677 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 PCSK9Q8NBP7 692 aaKnown RBP18.34■□□□□ 0.53
PHGDH-208ENST00000641023 FEZF2Q8TBJ5 459 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 CXCL16Q9H2A7 254 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 CREBZFQ9NS37 354 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 LCMT1Q9UIC8 334 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 KIAA1257Q9ULG3 409 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 CDY2AQ9Y6F7 541 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 CASP8AP2Q9UKL3 1982 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 A0A0U1RQG5 324 aaPredicted RBP18.34■□□□□ 0.53
PHGDH-208ENST00000641023 RPS6KA5O75582 802 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 SASH3O75995 380 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 PROSCO94903 275 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 HEXIM1O94992 359 aaKnown RBP18.34■□□□□ 0.53
PHGDH-208ENST00000641023 VDRP11473 427 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 CAP1Q01518 475 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 MAATS1Q7Z4T9 603 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 SERINC5Q86VE9 423 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 SESTD1Q86VW0 696 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 KLHDC9Q8NEP7 349 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 CCDC26Q8TAB7 109 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 HEXIM2Q96MH2 286 aaKnown RBP18.34■□□□□ 0.53
PHGDH-208ENST00000641023 TWNKQ96RR1 684 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 HINFPQ9BQA5 517 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 TRIM7Q9C029 511 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 ELOVL4Q9GZR5 314 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 SLITRK6Q9H5Y7 841 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 FAM53CQ9NYF3 392 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 TUBGCP4Q9UGJ1 667 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 SRRDQ9UH36 339 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 IPPQ9Y573 584 aa18.34■□□□□ 0.53
PHGDH-208ENST00000641023 SMIM28A0A1B0GU29 152 aa18.33■□□□□ 0.52
PHGDH-208ENST00000641023 MAP2K7O14733 419 aa18.33■□□□□ 0.52
PHGDH-208ENST00000641023 GLI1P08151 1106 aa18.33■□□□□ 0.52
PHGDH-208ENST00000641023 CST5P28325 142 aaPredicted RBP18.33■□□□□ 0.52
PHGDH-208ENST00000641023 TNFRSF8P28908 595 aa18.33■□□□□ 0.52
PHGDH-208ENST00000641023 TAP1Q03518 808 aa18.33■□□□□ 0.52
PHGDH-208ENST00000641023 XKR4Q5GH76 650 aa18.33■□□□□ 0.52
PHGDH-208ENST00000641023 KRT222Q8N1A0 295 aa18.33■□□□□ 0.52
PHGDH-208ENST00000641023 NT5C1AQ9BXI3 368 aa18.33■□□□□ 0.52
PHGDH-208ENST00000641023 DDX47Q9H0S4 455 aaKnown RBP18.33■□□□□ 0.52
PHGDH-208ENST00000641023 HMGXB4Q9UGU5 601 aa18.33■□□□□ 0.52
PHGDH-208ENST00000641023 IP6K2Q9UHH9 426 aa18.33■□□□□ 0.52
PHGDH-208ENST00000641023 SNX9Q9Y5X1 595 aa18.33■□□□□ 0.52
PHGDH-208ENST00000641023 RAD51CO43502 376 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 TRPA1O75762 1119 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 HMGCRP04035 888 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 PYGMP11217 842 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 ITGA4P13612 1032 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 KCNE1P15382 129 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 NDST1P52848 882 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 GUCY2DQ02846 1103 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 ORC1Q13415 861 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 CNGA2Q16280 664 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 SGO2Q562F6 1265 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 DNAJC24Q6P3W2 148 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 RPAINQ86UA6 219 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 C18orf25Q96B23 403 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-208ENST00000641023 EPB41L5Q9HCM4 733 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 GDF3Q9NR23 364 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 KLK14Q9P0G3 267 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 RALGAPA2Q2PPJ7 1873 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 CASP8Q14790 479 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 C9orf57Q5W0N0 161 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 DENND1BQ6P3S1 775 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 DCUN1D2Q6PH85 259 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 CPNE8Q86YQ8 564 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 SMG8Q8ND04 991 aaKnown RBP18.32■□□□□ 0.52
PHGDH-208ENST00000641023 RNF39Q9H2S5 420 aa18.32■□□□□ 0.52
PHGDH-208ENST00000641023 CHST12Q9NRB3 414 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms