RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 SLITRK6Q9H5Y7 841 aa15.04■□□□□ -0
LINC00339-211ENST00000641009 BRD9Q9H8M2 597 aa15.04■□□□□ -0
LINC00339-211ENST00000641009 TFIP11Q9UBB9 837 aaKnown RBP15.04■□□□□ -0
LINC00339-211ENST00000641009 PCDHB13Q9Y5F0 798 aa15.04■□□□□ -0
LINC00339-211ENST00000641009 GOLGA8IPA6NC78 632 aa15.03■□□□□ -0
LINC00339-211ENST00000641009 GOLGA8JA6NMD2 632 aa15.03■□□□□ -0
LINC00339-211ENST00000641009 PRPF6O94906 941 aaKnown RBP15.03■□□□□ -0
LINC00339-211ENST00000641009 SP9P0CG40 484 aa15.03■□□□□ -0
LINC00339-211ENST00000641009 TARSP26639 723 aaKnown RBP15.03■□□□□ -0
LINC00339-211ENST00000641009 STXBP5Q5T5C0 1151 aa15.03■□□□□ -0
LINC00339-211ENST00000641009 FOXD4L5Q5VV16 416 aaPredicted RBP15.03■□□□□ -0
LINC00339-211ENST00000641009 WSCD1Q658N2 575 aa15.03■□□□□ -0
LINC00339-211ENST00000641009 METTL23Q86XA0 190 aa15.03■□□□□ -0
LINC00339-211ENST00000641009 NOC3LQ8WTT2 800 aaKnown RBP15.03■□□□□ -0
LINC00339-211ENST00000641009 FOXD4L4Q8WXT5 416 aaPredicted RBP15.03■□□□□ -0
LINC00339-211ENST00000641009 BORCS6Q96GS4 357 aa15.03■□□□□ -0
LINC00339-211ENST00000641009 FAM84AQ96KN4 292 aa15.03■□□□□ -0
LINC00339-211ENST00000641009 CBWD1Q9BRT8 395 aa15.03■□□□□ -0
LINC00339-211ENST00000641009 BCO2Q9BYV7 579 aa15.03■□□□□ -0
LINC00339-211ENST00000641009 ZCWPW1Q9H0M4 648 aa15.03■□□□□ -0
LINC00339-211ENST00000641009 PCIF1Q9H4Z3 704 aa15.03■□□□□ -0
LINC00339-211ENST00000641009 ZNF334Q9HCZ1 680 aaPredicted RBP15.03■□□□□ -0
LINC00339-211ENST00000641009 DSEQ9UL01 958 aa15.03■□□□□ -0
LINC00339-211ENST00000641009 DNAH14Q0VDD8 3507 aa15.03■□□□□ -0
LINC00339-211ENST00000641009 GREB1Q4ZG55 1949 aa15.03■□□□□ -0
LINC00339-211ENST00000641009 OTOGLQ3ZCN5 2332 aa15.03■□□□□ -0
LINC00339-211ENST00000641009 SHISA7A6NL88 538 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 KPNA7A9QM74 516 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 SPTLC2O15270 562 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 PSMC3P17980 439 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 GARTP22102 1010 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 GDI1P31150 447 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 TFAMQ00059 246 aaKnown RBP15.02■□□□□ -0
LINC00339-211ENST00000641009 SV2CQ496J9 727 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 SCARA3Q6AZY7 606 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 DNAJB7Q7Z6W7 309 aaPredicted RBP15.02■□□□□ -0
LINC00339-211ENST00000641009 NT5DC4Q86YG4 428 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 GPIHBP1Q8IV16 184 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 BRSK2Q8IWQ3 736 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 MAML2Q8IZL2 1156 aaPredicted RBP15.02■□□□□ -0
LINC00339-211ENST00000641009 GLIS3Q8NEA6 775 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 DNASE1L2Q92874 299 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 HPS3Q969F9 1004 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 PSMG2Q969U7 264 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 SEPT5Q99719 369 aaPredicted RBP15.02■□□□□ -0
LINC00339-211ENST00000641009 LPIN3Q9BQK8 851 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 OSBPL6Q9BZF3 934 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 SPATA6Q9NWH7 488 aaPredicted RBP15.02■□□□□ -0
LINC00339-211ENST00000641009 RBAKQ9NYW8 714 aaPredicted RBP15.02■□□□□ -0
LINC00339-211ENST00000641009 ANAPC1Q9H1A4 1944 aa15.02■□□□□ -0
LINC00339-211ENST00000641009 HEPACAM2A8MVW5 462 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 PPP6R2O75170 966 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 ITGB3P05106 788 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 POLR2BP30876 1174 aaKnown RBP15.01□□□□□ -0.01
LINC00339-211ENST00000641009 ALCAMQ13740 583 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 FOXD4L6Q3SYB3 417 aaPredicted RBP15.01□□□□□ -0.01
LINC00339-211ENST00000641009 MGAT5BQ3V5L5 792 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 FOXD4L3Q6VB84 417 aaPredicted RBP15.01□□□□□ -0.01
LINC00339-211ENST00000641009 ZNF852Q6ZMS4 543 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 GAREM2Q75VX8 874 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 LRRTM3Q86VH5 581 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 CCDC65Q8IXS2 484 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 ADSSL1Q8N142 457 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 THEM5Q8N1Q8 247 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 C1orf127Q8N9H9 656 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 IRF7Q92985 503 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 RSPRY1Q96DX4 576 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 ZNF560Q96MR9 790 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 GPR88Q9GZN0 384 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 TRPV4Q9HBA0 871 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 ASB3Q9Y575 518 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 PTPRDP23468 1912 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 LDHAP00338 332 aaKnown RBP15.01□□□□□ -0.01
LINC00339-211ENST00000641009 ATF6P18850 670 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 GABRR2P28476 465 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 E2F4Q16254 413 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 MFSD6LQ8IWD5 586 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 FAM200AQ8TCP9 573 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 KCNG4Q8TDN1 519 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 DEPDC1BQ8WUY9 529 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 SNX21Q969T3 373 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 CLDN23Q96B33 292 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 DHX58Q96C10 678 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 ZNF396Q96N95 335 aaPredicted RBP15.01□□□□□ -0.01
LINC00339-211ENST00000641009 MKNK1Q9BUB5 465 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 TNMDQ9H2S6 317 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 ATXN3LQ9H3M9 355 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 TMEM206Q9H813 350 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 KBTBD4Q9NVX7 518 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 ABI2Q9NYB9 513 aaPredicted RBP15.01□□□□□ -0.01
LINC00339-211ENST00000641009 HSFX1Q9UBD0 423 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 NDRG2Q9UN36 371 aaKnown RBP15.01□□□□□ -0.01
LINC00339-211ENST00000641009 AGAP1Q9UPQ3 857 aa15.01□□□□□ -0.01
LINC00339-211ENST00000641009 ATG2BQ96BY7 2078 aa15□□□□□ -0.01
LINC00339-211ENST00000641009 ZNF263O14978 683 aa15□□□□□ -0.01
LINC00339-211ENST00000641009 LAMTOR5O43504 91 aa15□□□□□ -0.01
LINC00339-211ENST00000641009 EXTL3O43909 919 aa15□□□□□ -0.01
LINC00339-211ENST00000641009 PNPLA4P41247 253 aa15□□□□□ -0.01
LINC00339-211ENST00000641009 TUFMP49411 452 aaKnown RBP15□□□□□ -0.01
LINC00339-211ENST00000641009 FZD5Q13467 585 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms