RNA–Protein interactions for RNA: ENST00000640807.1

KCNMA1-289, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-289ENST00000640807 PLVAPQ9BX97 442 aa12.67□□□□□ -0.38
KCNMA1-289ENST00000640807 FAM124BQ9H5Z6 455 aaPredicted RBP12.67□□□□□ -0.38
KCNMA1-289ENST00000640807 RANBP2P49792 3224 aaKnown RBP12.67□□□□□ -0.38
KCNMA1-289ENST00000640807 PDGFRBP09619 1106 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 PCSK1P29120 753 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 TKTP29401 623 aaKnown RBP12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 ADKP55263 362 aaKnown RBP12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 DPY19L2P1Q6NXN4 242 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 OR8K1Q8NGG5 319 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 C11orf84Q9BUA3 381 aaPredicted RBP12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 NT5C1AQ9BXI3 368 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 NAA15Q9BXJ9 866 aaKnown RBP12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 NKX2-4Q9H2Z4 354 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 MYO6Q9UM54 1294 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 LRRC53A6NM62 1247 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 F8VZ95 297 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 GFPT2O94808 682 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 RB1P06400 928 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 CD19P15391 556 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 SOX5P35711 763 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 GSDMDP57764 484 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 BPIFB4P59827 614 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 GPIHBP1Q8IV16 184 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 VPS52Q8N1B4 723 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 BCL7CQ8WUZ0 217 aaPredicted RBP12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 TTYH3Q9C0H2 523 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 DDX43Q9NXZ2 648 aaKnown RBP12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 AJAP1Q9UKB5 411 aaPredicted RBP12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 YBX2Q9Y2T7 364 aaKnown RBP12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 LAMA2P24043 3122 aaKnown RBP12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 PTPRSQ13332 1948 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 URODP06132 367 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 NDST1P52848 882 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 PTK2Q05397 1052 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 PDXDC1Q6P996 788 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 DDX53Q86TM3 631 aaKnown RBP12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 UNC93AQ86WB7 457 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 RBBP8NLQ8NC74 664 aaPredicted RBP12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 RIN2Q8WYP3 895 aaPredicted RBP12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 TNIP3Q96KP6 325 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 SDCBP2Q9H190 292 aa12.66□□□□□ -0.38
KCNMA1-289ENST00000640807 H7C4K7 107 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 C2CD2LO14523 706 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 CYP26A1O43174 497 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 SOD2P04179 222 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 PNMA6AP0CW24 399 aaPredicted RBP12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 WARSP23381 471 aaKnown RBP12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 DNAJB2P25686 324 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 PLCB3Q01970 1234 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 TAP1Q03518 808 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 TBX2Q13207 712 aaPredicted RBP12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 ASIC2Q16515 512 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 ZNF280DQ6N043 979 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 ANKS3Q6ZW76 656 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 TMC7Q7Z402 723 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 SPATA18Q8TC71 538 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 BAP1Q92560 729 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 B3GALT6Q96L58 329 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 HEXIM2Q96MH2 286 aaKnown RBP12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 TNRC18O15417 2968 aaPredicted RBP12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 NRDCO43847 1150 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 MFAP3LO75121 409 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 CYP11A1P05108 521 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 FERP16591 822 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 GLUD2P49448 558 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 TSPY1Q01534 308 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 CCDC173Q0VFZ6 552 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 CTXN3Q4LDR2 81 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 VARS2Q5ST30 1063 aaKnown RBP12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 FBXO22Q8NEZ5 403 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 MICAL1Q8TDZ2 1067 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 PDCL3Q9H2J4 239 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 CERS4Q9HA82 394 aa12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 ALG13Q9NP73 1137 aaKnown RBP12.65□□□□□ -0.38
KCNMA1-289ENST00000640807 LPXNO60711 386 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 CILPO75339 1184 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 CSPG5O95196 566 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 FGFR3P22607 806 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 GOLGA8FQ08AF8 430 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 GOLGA8DPQ0D2H9 430 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 INCA1Q0VD86 236 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 TDRD12Q587J7 1177 aaKnown RBP12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 CCDC186Q7Z3E2 898 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 FAM71AQ8IYT1 594 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 KBTBD7Q8WVZ9 684 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 TIFAQ96CG3 184 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 TMEM176AQ96HP8 235 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 STXBP5LQ9Y2K9 1186 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 MYO7AQ13402 2215 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 RNF225M0QZC1 329 aaPredicted RBP12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 ACO1P21399 889 aaKnown RBP12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 ACAT1P24752 427 aaKnown RBP12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 JAM2P57087 298 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 ERVK-21P61565 698 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 SMAD3P84022 425 aaKnown RBP12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 ORC1Q13415 861 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 TAS1R1Q7RTX1 841 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 ACOT1Q86TX2 421 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 ARNTL2Q8WYA1 636 aa12.64□□□□□ -0.39
KCNMA1-289ENST00000640807 MRPL17Q9NRX2 175 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms