RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 HGSNATQ68CP4 663 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 DPH6Q7L8W6 267 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 SLC47A2Q86VL8 602 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 METTL23Q86XA0 190 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 TMEM139Q8IV31 216 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 HERC6Q8IVU3 1022 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 ADGRF2Q8IZF7 708 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 PHOSPHO2Q8TCD6 241 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 CCDC42Q96M95 316 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.36□□□□□ -0.91
HLA-B-258ENST00000640615 UBE2OQ9C0C9 1292 aaKnown RBP9.36□□□□□ -0.91
HLA-B-258ENST00000640615 ELOVL4Q9GZR5 314 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 DEF6Q9H4E7 631 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 CWH43Q9H720 699 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 NHEJ1Q9H9Q4 299 aaPredicted RBP9.36□□□□□ -0.91
HLA-B-258ENST00000640615 ACP6Q9NPH0 428 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 ARHGAP20Q9P2F6 1191 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 BARX2Q9UMQ3 279 aaPredicted RBP9.36□□□□□ -0.91
HLA-B-258ENST00000640615 CNTN6Q9UQ52 1028 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 TIMM13Q9Y5L4 95 aaPredicted RBP9.36□□□□□ -0.91
HLA-B-258ENST00000640615 MRPL42Q9Y6G3 142 aaKnown RBP9.36□□□□□ -0.91
HLA-B-258ENST00000640615 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.36□□□□□ -0.91
HLA-B-258ENST00000640615 EYSQ5T1H1 3165 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 ARHGEF37A1IGU5 675 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 TMEM189-UBE2V1I3L0A0 370 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 ARHGAP6O43182 974 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 TLL1O43897 1013 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 AKR1B10O60218 316 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 PDGFRBP09619 1106 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 FAM163BP0C2L3 166 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 CD19P15391 556 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 CYP11B1P15538 503 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 TNFAIP3P21580 790 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 FECHP22830 423 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 WARSP23381 471 aaKnown RBP9.35□□□□□ -0.91
HLA-B-258ENST00000640615 PRKCIP41743 596 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 PDE6CP51160 858 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 ZNF132P52740 706 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 TTC3P53804 2025 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 RAD23BP54727 409 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 HTRA4P83105 476 aaPredicted RBP9.35□□□□□ -0.91
HLA-B-258ENST00000640615 INCA1Q0VD86 236 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 ORC1Q13415 861 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 SHHQ15465 462 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 HS1BP3Q53T59 392 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 C9orf50Q5SZB4 431 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 TAF3Q5VWG9 929 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 KCNT2Q6UVM3 1135 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 Q7L0L9 218 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 ZNF571Q7Z3V5 609 aaPredicted RBP9.35□□□□□ -0.91
HLA-B-258ENST00000640615 LIMS2Q7Z4I7 341 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 NOP9Q86U38 636 aaKnown RBP9.35□□□□□ -0.91
HLA-B-258ENST00000640615 VPS36Q86VN1 386 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 UNC93AQ86WB7 457 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 TMEM86AQ8N2M4 240 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 FIBCD1Q8N539 461 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 WHAMMQ8TF30 809 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 SLC20A1Q8WUM9 679 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 KBTBD7Q8WVZ9 684 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 TMEM176AQ96HP8 235 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 SUSD3Q96L08 255 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 RNPC3Q96LT9 517 aaKnown RBP9.35□□□□□ -0.91
HLA-B-258ENST00000640615 HEXIM2Q96MH2 286 aaKnown RBP9.35□□□□□ -0.91
HLA-B-258ENST00000640615 ZNF558Q96NG5 402 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 TWNKQ96RR1 684 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 RAD9AQ99638 391 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 AGPAT1Q99943 283 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 NT5C1AQ9BXI3 368 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 DNAI2Q9GZS0 605 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 FAM124BQ9H5Z6 455 aaPredicted RBP9.35□□□□□ -0.91
HLA-B-258ENST00000640615 RC3H2Q9HBD1 1191 aaKnown RBP9.35□□□□□ -0.91
HLA-B-258ENST00000640615 SEPT11Q9NVA2 429 aaKnown RBP9.35□□□□□ -0.91
HLA-B-258ENST00000640615 MARCH5Q9NX47 278 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 DDX43Q9NXZ2 648 aaKnown RBP9.35□□□□□ -0.91
HLA-B-258ENST00000640615 HMGXB4Q9UGU5 601 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 ADAM28Q9UKQ2 775 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 DSEQ9UL01 958 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 PCDHB8Q9UN66 801 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 INSL6Q9Y581 213 aa9.35□□□□□ -0.91
HLA-B-258ENST00000640615 SSU72P8A0A1W2PR75 194 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 M0QZQ0 153 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 THAP12O43422 761 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 HCRTO43612 131 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 PAEPP09466 180 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 LAG3P18627 525 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 BRD2P25440 801 aaKnown RBP9.34□□□□□ -0.91
HLA-B-258ENST00000640615 LMO2P25791 158 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 GNA15P30679 374 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 CYLC1P35663 651 aaPredicted RBP9.34□□□□□ -0.91
HLA-B-258ENST00000640615 LHX1P48742 406 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 ELAVL2Q12926 359 aaKnown RBP9.34□□□□□ -0.91
HLA-B-258ENST00000640615 MAPK8IP2Q13387 824 aaPredicted RBP9.34□□□□□ -0.91
HLA-B-258ENST00000640615 MTF1Q14872 753 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 RASIP1Q5U651 963 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 FAM171A1Q5VUB5 890 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 SMYD5Q6GMV2 418 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 RAD9BQ6WBX8 426 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 ACOT1Q86TX2 421 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 OSTM1Q86WC4 334 aa9.34□□□□□ -0.91
HLA-B-258ENST00000640615 TMEM173Q86WV6 379 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms