RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 A0A1W2PQC6 194 aa23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 GOLGA6L3A6NEY3 463 aa23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 CXCL14O95715 111 aa23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 WEE2P0C1S8 567 aa23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 FAM163BP0C2L3 166 aa23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 CD58P19256 250 aa23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 WARSP23381 471 aaKnown RBP23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 KLK7P49862 253 aa23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 MFAP3P55082 362 aa23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 ERVFC1P60507 584 aa23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 CTXN3Q4LDR2 81 aa23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 PHLDB3Q6NSJ2 640 aa23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 PRSS55Q6UWB4 352 aaPredicted RBP23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 ENOSF1Q7L5Y1 443 aa23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 TTC39CQ8N584 583 aa23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 AUTS2Q8WXX7 1259 aa23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 MRPL45Q9BRJ2 306 aaKnown RBP23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 PRDM12Q9H4Q4 367 aa23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 PLCB1Q9NQ66 1216 aa23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 DDX43Q9NXZ2 648 aaKnown RBP23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 SIK3Q9Y2K2 1263 aa23.07■■□□□ 1.28
TSPAN9-208ENST00000640568 TRIM21P19474 475 aaKnown RBP23.06■■□□□ 1.28
TSPAN9-208ENST00000640568 RFX1P22670 979 aa23.06■■□□□ 1.28
TSPAN9-208ENST00000640568 PTPN14Q15678 1187 aa23.06■■□□□ 1.28
TSPAN9-208ENST00000640568 PTPN21Q16825 1174 aa23.06■■□□□ 1.28
TSPAN9-208ENST00000640568 KLHDC7AQ5VTJ3 777 aa23.06■■□□□ 1.28
TSPAN9-208ENST00000640568 KIAA0319Q5VV43 1072 aa23.06■■□□□ 1.28
TSPAN9-208ENST00000640568 GPR65Q8IYL9 337 aa23.06■■□□□ 1.28
TSPAN9-208ENST00000640568 FAM161BQ96MY7 647 aa23.06■■□□□ 1.28
TSPAN9-208ENST00000640568 DNAI2Q9GZS0 605 aa23.06■■□□□ 1.28
TSPAN9-208ENST00000640568 SIX2Q9NPC8 291 aa23.06■■□□□ 1.28
TSPAN9-208ENST00000640568 CHD7Q9P2D1 2997 aa23.06■■□□□ 1.28
TSPAN9-208ENST00000640568 CDH23Q9H251 3354 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 A8MXQ7 604 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 OAZ2O95190 189 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 GNL1P36915 607 aaPredicted RBP23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 APBA1Q02410 837 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 GPR153Q6NV75 609 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 GJB7Q6PEY0 223 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 LIMS2Q7Z4I7 341 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 LNX1Q8TBB1 728 aaPredicted RBP23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 KBTBD7Q8WVZ9 684 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 ARID3AQ99856 593 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 EMILIN2Q9BXX0 1053 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 OXCT2Q9BYC2 517 aaPredicted RBP23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 SDCBP2Q9H190 292 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 FAM124BQ9H5Z6 455 aaPredicted RBP23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 DNAJC12Q9UKB3 198 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 CHD9Q3L8U1 2897 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 FSCN2O14926 492 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 PCSK1P29120 753 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 IRS1P35568 1242 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 RAPGEF1Q13905 1077 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 MRPL58Q14197 206 aaKnown RBP23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 GRIN2CQ14957 1233 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 ARHGAP44Q17R89 818 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 OSTM1Q86WC4 334 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 CISHQ9NSE2 258 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 MTRRQ9UBK8 725 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 BARX2Q9UMQ3 279 aaPredicted RBP23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 DAAM1Q9Y4D1 1078 aa23.05■■□□□ 1.28
TSPAN9-208ENST00000640568 OR6C75A6NL08 312 aa23.04■■□□□ 1.28
TSPAN9-208ENST00000640568 GABRDO14764 452 aa23.04■■□□□ 1.28
TSPAN9-208ENST00000640568 UCHL3P15374 230 aa23.04■■□□□ 1.28
TSPAN9-208ENST00000640568 TSPY1Q01534 308 aa23.04■■□□□ 1.28
TSPAN9-208ENST00000640568 CAMK1Q14012 370 aa23.04■■□□□ 1.28
TSPAN9-208ENST00000640568 KAT5Q92993 513 aa23.04■■□□□ 1.28
TSPAN9-208ENST00000640568 MRPL38Q96DV4 380 aaKnown RBP23.04■■□□□ 1.28
TSPAN9-208ENST00000640568 GAS2L1Q99501 681 aaPredicted RBP23.04■■□□□ 1.28
TSPAN9-208ENST00000640568 PCDHB4Q9Y5E5 795 aa23.04■■□□□ 1.28
TSPAN9-208ENST00000640568 BACE2Q9Y5Z0 518 aa23.04■■□□□ 1.28
TSPAN9-208ENST00000640568 FHOD1Q9Y613 1164 aa23.04■■□□□ 1.28
TSPAN9-208ENST00000640568 IRAK3Q9Y616 596 aa23.04■■□□□ 1.28
TSPAN9-208ENST00000640568 PDGFRBP09619 1106 aa23.03■■□□□ 1.28
TSPAN9-208ENST00000640568 NDST1P52848 882 aa23.03■■□□□ 1.28
TSPAN9-208ENST00000640568 POLR2FP61218 127 aaKnown RBP23.03■■□□□ 1.28
TSPAN9-208ENST00000640568 INCA1Q0VD86 236 aa23.03■■□□□ 1.28
TSPAN9-208ENST00000640568 IQCEQ6IPM2 695 aa23.03■■□□□ 1.28
TSPAN9-208ENST00000640568 CACNA2D4Q7Z3S7 1137 aa23.03■■□□□ 1.28
TSPAN9-208ENST00000640568 UNC93AQ86WB7 457 aa23.03■■□□□ 1.28
TSPAN9-208ENST00000640568 GLYCTKQ8IVS8 523 aa23.03■■□□□ 1.28
TSPAN9-208ENST00000640568 MRPL43Q8N983 215 aaKnown RBP23.03■■□□□ 1.28
TSPAN9-208ENST00000640568 PPP2R3CQ969Q6 453 aa23.03■■□□□ 1.28
TSPAN9-208ENST00000640568 JAKMIP2Q96AA8 810 aa23.03■■□□□ 1.28
TSPAN9-208ENST00000640568 ACBD6Q9BR61 282 aa23.03■■□□□ 1.28
TSPAN9-208ENST00000640568 GANQ9H2C0 597 aa23.03■■□□□ 1.28
TSPAN9-208ENST00000640568 FNIP2Q9P278 1114 aa23.03■■□□□ 1.28
TSPAN9-208ENST00000640568 FBXL5Q9UKA1 691 aa23.03■■□□□ 1.28
TSPAN9-208ENST00000640568 STXBP5LQ9Y2K9 1186 aa23.03■■□□□ 1.28
TSPAN9-208ENST00000640568 CDY1Q9Y6F8 540 aa23.03■■□□□ 1.28
TSPAN9-208ENST00000640568 C2orf71A6NGG8 1288 aa23.02■■□□□ 1.28
TSPAN9-208ENST00000640568 AP5Z1O43299 807 aa23.02■■□□□ 1.28
TSPAN9-208ENST00000640568 CPB1P15086 417 aa23.02■■□□□ 1.28
TSPAN9-208ENST00000640568 RPL17P18621 184 aaKnown RBP23.02■■□□□ 1.28
TSPAN9-208ENST00000640568 ACAT1P24752 427 aaKnown RBP23.02■■□□□ 1.28
TSPAN9-208ENST00000640568 NDUFV1P49821 464 aa23.02■■□□□ 1.28
TSPAN9-208ENST00000640568 ARPP19P56211 112 aa23.02■■□□□ 1.28
TSPAN9-208ENST00000640568 ZNF394Q53GI3 561 aa23.02■■□□□ 1.28
TSPAN9-208ENST00000640568 TNIP3Q96KP6 325 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms