RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 LRMPQ12912 555 aa14.15□□□□□ -0.14
GTF3A-209ENST00000640289 VWA3BQ502W6 1294 aa14.15□□□□□ -0.14
GTF3A-209ENST00000640289 PALB2Q86YC2 1186 aa14.15□□□□□ -0.14
GTF3A-209ENST00000640289 TMEM86AQ8N2M4 240 aa14.15□□□□□ -0.14
GTF3A-209ENST00000640289 VN1R2Q8NFZ6 395 aa14.15□□□□□ -0.14
GTF3A-209ENST00000640289 OR10T2Q8NGX3 314 aa14.15□□□□□ -0.14
GTF3A-209ENST00000640289 LMO3Q8TAP4 145 aa14.15□□□□□ -0.14
GTF3A-209ENST00000640289 TATDN2Q93075 761 aa14.15□□□□□ -0.14
GTF3A-209ENST00000640289 PPP2R3CQ969Q6 453 aa14.15□□□□□ -0.14
GTF3A-209ENST00000640289 SDCBP2Q9H190 292 aa14.15□□□□□ -0.14
GTF3A-209ENST00000640289 NDST4Q9H3R1 872 aa14.15□□□□□ -0.14
GTF3A-209ENST00000640289 NME7Q9Y5B8 376 aa14.15□□□□□ -0.14
GTF3A-209ENST00000640289 VWA8A3KMH1 1905 aa14.15□□□□□ -0.14
GTF3A-209ENST00000640289 PES1O00541 588 aaKnown RBP14.14□□□□□ -0.15
GTF3A-209ENST00000640289 GABRDO14764 452 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 ADH1AP07327 375 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 SPATA31D3P0C874 917 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 EPCAMP16422 314 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 CDK11BP21127 795 aaKnown RBP14.14□□□□□ -0.15
GTF3A-209ENST00000640289 ACAT1P24752 427 aaKnown RBP14.14□□□□□ -0.15
GTF3A-209ENST00000640289 LMO2P25791 158 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 CLCN4P51793 760 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 ZNF445P59923 1031 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 ROR1Q01973 937 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 CREMQ03060 361 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 WDR44Q5JSH3 913 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 SLC8B1Q6J4K2 584 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 SPATA31D4Q6ZUB0 917 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 DPH6Q7L8W6 267 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 CCDC150Q8NCX0 1101 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 EHBP1Q8NDI1 1231 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 MAFAQ8NHW3 353 aaPredicted RBP14.14□□□□□ -0.15
GTF3A-209ENST00000640289 FAM200AQ8TCP9 573 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 SLC22A17Q8WUG5 538 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 CDCA3Q99618 268 aaPredicted RBP14.14□□□□□ -0.15
GTF3A-209ENST00000640289 CRACR2AQ9BSW2 395 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 NIF3L1Q9GZT8 377 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 VPS16Q9H269 839 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 DDX43Q9NXZ2 648 aaKnown RBP14.14□□□□□ -0.15
GTF3A-209ENST00000640289 LIMA1Q9UHB6 759 aaKnown RBP14.14□□□□□ -0.15
GTF3A-209ENST00000640289 STXBP5LQ9Y2K9 1186 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 HCFC2Q9Y5Z7 792 aa14.14□□□□□ -0.15
GTF3A-209ENST00000640289 WDR27A2RRH5 827 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 TGM5O43548 720 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 TACC1O75410 805 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 CAVIN2O95810 425 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 GLP2RO95838 553 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 PDGFRBP09619 1106 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 WEE2P0C1S8 567 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 CPB1P15086 417 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 SLC9A1P19634 815 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 WARSP23381 471 aaKnown RBP14.13□□□□□ -0.15
GTF3A-209ENST00000640289 COPB1P53618 953 aaKnown RBP14.13□□□□□ -0.15
GTF3A-209ENST00000640289 APBA1Q02410 837 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 CETN1Q12798 172 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 ADAM15Q13444 863 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 KCNC3Q14003 757 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 SKIV2LQ15477 1246 aaKnown RBP14.13□□□□□ -0.15
GTF3A-209ENST00000640289 CCDC142Q17RM4 750 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 EP400NLQ6ZTU2 488 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 APTXQ7Z2E3 356 aaKnown RBP14.13□□□□□ -0.15
GTF3A-209ENST00000640289 THEM5Q8N1Q8 247 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 EFHBQ8N7U6 833 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 OR6B3Q8NGW1 331 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 ARID3AQ99856 593 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 BCO2Q9BYV7 579 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 INTS2Q9H0H0 1204 aaKnown RBP14.13□□□□□ -0.15
GTF3A-209ENST00000640289 CLDND1Q9NY35 253 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 GCNT4Q9P109 453 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 BARX2Q9UMQ3 279 aaPredicted RBP14.13□□□□□ -0.15
GTF3A-209ENST00000640289 TSC2P49815 1807 aa14.13□□□□□ -0.15
GTF3A-209ENST00000640289 OR6C75A6NL08 312 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 GLUD1P00367 558 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 P4HA1P13674 534 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 CD58P19256 250 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 GNL1P36915 607 aaPredicted RBP14.12□□□□□ -0.15
GTF3A-209ENST00000640289 LHX1P48742 406 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 PSMC1P62191 440 aaKnown RBP14.12□□□□□ -0.15
GTF3A-209ENST00000640289 DLX2Q07687 328 aaPredicted RBP14.12□□□□□ -0.15
GTF3A-209ENST00000640289 RAB33AQ14088 237 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 SLC39A12Q504Y0 691 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 LILRA6Q6PI73 481 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 RNF19BQ6ZMZ0 732 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 GBP6Q6ZN66 633 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 LRRTM3Q86VH5 581 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 ARHGEF19Q8IW93 802 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 RNF214Q8ND24 703 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 LPIN3Q9BQK8 851 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 ZCWPW1Q9H0M4 648 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 SNX25Q9H3E2 840 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 DPEP3Q9H4B8 488 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 PRDM6Q9NQX0 595 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 TMLHEQ9NVH6 421 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 HMGXB4Q9UGU5 601 aa14.12□□□□□ -0.15
GTF3A-209ENST00000640289 LRRC10BA6NIK2 292 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 A8MXQ7 604 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 ATP2C2O75185 946 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 TBX10O75333 385 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 ABLIM3O94929 683 aa14.11□□□□□ -0.15
GTF3A-209ENST00000640289 VNN2O95498 520 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms