RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 GTF2BQ00403 316 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 DNAJC3Q13217 504 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 DBN1Q16643 649 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 MMEL1Q495T6 779 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 FSCBQ5H9T9 825 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 ZNF572Q7Z3I7 529 aaPredicted RBP9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 RASGEF1CQ8N431 466 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 CEP120Q8N960 986 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 ACAP3Q96P50 834 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 DNAJC18Q9H819 358 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 ZC3H7BQ9UGR2 993 aaKnown RBP9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 SALL4Q9UJQ4 1053 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 CHMP2BQ9UQN3 213 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 KPNA7A9QM74 516 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 STIP1P31948 543 aaKnown RBP9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 ELF1P32519 619 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 BACE1P56817 501 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 PTK7Q13308 1070 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 METTL23Q86XA0 190 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 ADAM33Q9BZ11 813 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 EPS15L1Q9UBC2 864 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 PHRF1Q9P1Y6 1649 aaKnown RBP9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 IGKV6D-41A0A0C4DH26 115 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 APRTP07741 180 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 TXNP10599 105 aaKnown RBP9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 ITKQ08881 620 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 SMTNL2Q2TAL5 461 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 TAF1BQ53T94 588 aaPredicted RBP9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 DUPD1Q68J44 220 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 SPOPLQ6IQ16 392 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 RSPH3Q86UC2 560 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 FAM71AQ8IYT1 594 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 KIF2BQ8N4N8 673 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 ATXN2LQ8WWM7 1075 aaKnown RBP9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 AP5M1Q9H0R1 490 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 ALG13Q9NP73 1137 aaKnown RBP9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 PRMT7Q9NVM4 692 aaPredicted RBP9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 COL1A1P02452 1464 aaPredicted RBP9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 ZNF142P52746 1687 aaPredicted RBP9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 A8MXQ7 604 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 DIAPH2O60879 1101 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 NUDT17P0C025 328 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 NQO1P15559 274 aaKnown RBP9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 CTCFP49711 727 aaPredicted RBP9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 SERPINB9P50453 376 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 DLG4P78352 724 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 THOC5Q13769 683 aaKnown RBP9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 TMEM132DQ14C87 1099 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 SUGP1Q8IWZ8 645 aaKnown RBP9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 FAM161BQ96MY7 647 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 LRRC4BQ9NT99 713 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 CASQ2O14958 399 aaPredicted RBP9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 SHOX2O60902 331 aaPredicted RBP9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 KITP10721 976 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 KRT10P13645 584 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 IFI35P80217 286 aaPredicted RBP9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 PTK6Q13882 451 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 CYP4A22Q5TCH4 519 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 C1orf146Q5VVC0 180 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 C4orf22Q6V702 233 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 SHC3Q92529 594 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 TRIM4Q9C037 500 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 VPS11Q9H270 941 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 CD248Q9HCU0 757 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 BFARQ9NZS9 450 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 SLC24A2Q9UI40 661 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 PHTF1Q9UMS5 762 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 MTO1Q9Y2Z2 717 aaKnown RBP9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 LRP6O75581 1613 aa9.02□□□□□ -0.97
HNRNPU-219ENST00000639628 CCDC195A0A1B0GUA6 201 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 H3BRJ5 948 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 MAGEB2O15479 319 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 CYP1A2P05177 515 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 GSTA2P09210 222 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 KRT4P19013 534 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 GPD1P21695 349 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 MRPS9P82933 396 aaKnown RBP9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 EN1Q05925 392 aaPredicted RBP9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 SPOCD1Q6ZMY3 1216 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 LONP2Q86WA8 852 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 WDR49Q8IV35 697 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 CCDC117Q8IWD4 279 aaPredicted RBP9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 KAT5Q92993 513 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 NT5C1AQ9BXI3 368 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 NACA2Q9H009 215 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 SCAF8Q9UPN6 1271 aaKnown RBP9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 ARHGEF37A1IGU5 675 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 TISP43B9A030 160 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 SNRPAP09012 282 aaKnown RBP9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 HSP90AA5PQ58FG0 334 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 SH2D4BQ5SQS7 431 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 C12orf56Q8IXR9 622 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 PRELID2Q8N945 189 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 OTUD5Q96G74 571 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 ZNF560Q96MR9 790 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 MANSC1Q9H8J5 431 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 METTL5Q9NRN9 209 aaKnown RBP9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 NAALADL1Q9UQQ1 740 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 HBP1O60381 514 aa9.01□□□□□ -0.97
HNRNPU-219ENST00000639628 AP2B1P63010 937 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms