RNA–Protein interactions for RNA: ENST00000639071.1

NECAP1-215, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-215ENST00000639071 SLITRK1Q96PX8 696 aa9.91□□□□□ -0.82
NECAP1-215ENST00000639071 DENND2DQ9H6A0 471 aaPredicted RBP9.91□□□□□ -0.82
NECAP1-215ENST00000639071 RNPEPL1Q9HAU8 725 aa9.91□□□□□ -0.82
NECAP1-215ENST00000639071 ZNF70Q9UC06 446 aaPredicted RBP9.91□□□□□ -0.82
NECAP1-215ENST00000639071 ACTL7BQ9Y614 415 aa9.91□□□□□ -0.82
NECAP1-215ENST00000639071 LOXHD1Q8IVV2 1947 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 SPDYE2BA6NHP3 402 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 NPM3O75607 178 aaKnown RBP9.9□□□□□ -0.82
NECAP1-215ENST00000639071 SPDYE6P0CI01 402 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 CALB2P22676 271 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 ALDH3A1P30838 453 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 SKIV2L2P42285 1042 aaKnown RBP9.9□□□□□ -0.82
NECAP1-215ENST00000639071 PTGER2P43116 358 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 OGDHQ02218 1023 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 ZNF252P-AS1Q0IIN9 211 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 WDR72Q3MJ13 1102 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 MSS51Q4VC12 460 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 KCNT1Q5JUK3 1230 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 CYP4A22Q5TCH4 519 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 ARHGEF16Q5VV41 709 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 RFX8Q6ZV50 586 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 USP37Q86T82 979 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 ABRAQ8N0Z2 381 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 OGFOD1Q8N543 542 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 ZNF75CPQ92670 426 aaPredicted RBP9.9□□□□□ -0.82
NECAP1-215ENST00000639071 TRIM11Q96F44 468 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 FBXL18Q96ME1 805 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 MRPL47Q9HD33 250 aaKnown RBP9.9□□□□□ -0.82
NECAP1-215ENST00000639071 BATF3Q9NR55 127 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 TBC1D22BQ9NU19 505 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 CYP39A1Q9NYL5 469 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 SLC17A7Q9P2U7 560 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 PCNTO95613 3336 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 ZNF541Q9H0D2 1346 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 CFAP69A5D8W1 941 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 DCTN3O75935 186 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 TPBGLP0DKB5 382 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 GNAZP19086 355 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 ACO1P21399 889 aaKnown RBP9.9□□□□□ -0.82
NECAP1-215ENST00000639071 GDF10P55107 478 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 GPX6P59796 221 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 CUL2Q13617 745 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 DLGAP5Q15398 846 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 MTERF2Q49AM1 385 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 EAPPQ56P03 285 aaPredicted RBP9.9□□□□□ -0.82
NECAP1-215ENST00000639071 NLGN1Q8N2Q7 840 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 AGGF1Q8N302 714 aaeCLIP9.9□□□□□ -0.82
NECAP1-215ENST00000639071 ALLCQ8N6M5 410 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 OR5B17Q8NGF7 314 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 FEZF2Q8TBJ5 459 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 STK32AQ8WU08 396 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 TMEM174Q8WUU8 243 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 TMEM143Q96AN5 459 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 SENP7Q9BQF6 1050 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 POLR3FQ9H1D9 316 aaPredicted RBP9.9□□□□□ -0.82
NECAP1-215ENST00000639071 ZWILCHQ9H900 591 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 METTL5Q9NRN9 209 aaKnown RBP9.9□□□□□ -0.82
NECAP1-215ENST00000639071 NUB1Q9Y5A7 615 aa9.9□□□□□ -0.82
NECAP1-215ENST00000639071 THSD7AQ9UPZ6 1657 aa9.9□□□□□ -0.83
NECAP1-215ENST00000639071 EME2A4GXA9 379 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-215ENST00000639071 PRPF4O43172 522 aaKnown RBP eCLIP9.89□□□□□ -0.83
NECAP1-215ENST00000639071 LYPLA2O95372 231 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 ABHD2P08910 425 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 GLRA2P23416 452 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 PTDSS1P48651 473 aaKnown RBP9.89□□□□□ -0.83
NECAP1-215ENST00000639071 TUBP50607 506 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 SNRPFP62306 86 aaKnown RBP9.89□□□□□ -0.83
NECAP1-215ENST00000639071 FNBP1LQ5T0N5 605 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 DCUN1D2Q6PH85 259 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 SPOCD1Q6ZMY3 1216 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.89□□□□□ -0.83
NECAP1-215ENST00000639071 APBB1IPQ7Z5R6 666 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-215ENST00000639071 LRRC6Q86X45 466 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 RHPN2Q8IUC4 686 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 TCP10LQ8TDR4 215 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 WNK4Q96J92 1243 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 MIPEPQ99797 713 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 HAPLN2Q9GZV7 340 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 XPNPEP1Q9NQW7 623 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 PSMC3IPQ9P2W1 217 aaPredicted RBP9.89□□□□□ -0.83
NECAP1-215ENST00000639071 CNTNAP1P78357 1384 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 TCRBV7S3A2A0A539 114 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 MAGEB2O15479 319 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 TYROBPO43914 113 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 TJP3O95049 919 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 NEFHP12036 1026 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 BRD2P25440 801 aaKnown RBP9.89□□□□□ -0.83
NECAP1-215ENST00000639071 GTF2H1P32780 548 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 CETN2P41208 172 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 PTP4A2Q12974 167 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 BLMHQ13867 455 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 PARP6Q2NL67 630 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 ZACNQ401N2 412 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 KHDC1Q4VXA5 237 aaKnown RBP9.89□□□□□ -0.83
NECAP1-215ENST00000639071 SLC27A3Q5K4L6 730 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 RNASEH2BQ5TBB1 312 aaKnown RBP9.89□□□□□ -0.83
NECAP1-215ENST00000639071 PLEKHA7Q6IQ23 1121 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 CENPUQ71F23 418 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 ENOSF1Q7L5Y1 443 aa9.89□□□□□ -0.83
NECAP1-215ENST00000639071 RIBC1Q8N443 379 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms