RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 GNA15P30679 374 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 CETN2P41208 172 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 GPX6P59796 221 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 GAD2Q05329 585 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 OVGP1Q12889 678 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 CCDC142Q17RM4 750 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 RNASEH2BQ5TBB1 312 aaKnown RBP11.52□□□□□ -0.57
SNIP1-204ENST00000638725 TXNRD3NBQ6F5E7 133 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 ENDOVQ8N8Q3 282 aaKnown RBP11.52□□□□□ -0.57
SNIP1-204ENST00000638725 ARMC2Q8NEN0 867 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 FEZF2Q8TBJ5 459 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 SYTL5Q8TDW5 730 aaPredicted RBP11.52□□□□□ -0.57
SNIP1-204ENST00000638725 ASAP3Q8TDY4 903 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 ANKRD27Q96NW4 1050 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 MIPEPQ99797 713 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 TMEM121Q9BTD3 319 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 APOBEC3GQ9HC16 384 aaKnown RBP11.52□□□□□ -0.57
SNIP1-204ENST00000638725 ANKEF1Q9NU02 776 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 PTPRJQ12913 1337 aa11.52□□□□□ -0.57
SNIP1-204ENST00000638725 WDR64B1ANS9 1081 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 PDHA1P08559 390 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 PTPN4P29074 926 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 PCK1P35558 622 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 PTGER2P43116 358 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 PSMC4P43686 418 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 PTDSS1P48651 473 aaKnown RBP11.51□□□□□ -0.57
SNIP1-204ENST00000638725 RASSF2P50749 326 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 IRX1P78414 480 aaPredicted RBP11.51□□□□□ -0.57
SNIP1-204ENST00000638725 MORF4L2Q15014 288 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 WDR72Q3MJ13 1102 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 ZACNQ401N2 412 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 WASHC2DQ5SRD0 308 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 RFWD3Q6PCD5 774 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 TAS1R3Q7RTX0 852 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 RFWD2Q8NHY2 731 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 CEP170P1Q96L14 293 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 FNBP1Q96RU3 617 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 TMOD2Q9NZR1 351 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 KANSL3Q9P2N6 904 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 SCINQ9Y6U3 715 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 IVNS1ABPQ9Y6Y0 642 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 COL2A1P02458 1487 aaPredicted RBP11.51□□□□□ -0.57
SNIP1-204ENST00000638725 ENO4A6NNW6 628 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 E7ENQ6 273 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 C2CD2LO14523 706 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 TRAFD1O14545 582 aaPredicted RBP11.51□□□□□ -0.57
SNIP1-204ENST00000638725 CLGNO14967 610 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 VNN1O95497 513 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 ATP6V1C1P21283 382 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 SSTR1P30872 391 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 ZNF252P-AS1Q0IIN9 211 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 MTM1Q13496 603 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 CTC1Q2NKJ3 1217 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 SLC45A4Q5BKX6 768 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 CENPUQ71F23 418 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 CLNKQ7Z7G1 428 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 PHF13Q86YI8 300 aaPredicted RBP11.51□□□□□ -0.57
SNIP1-204ENST00000638725 RCOR2Q8IZ40 523 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 SAMD3Q8N6K7 520 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 SPIRE2Q8WWL2 714 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 RBM41Q96IZ5 413 aaKnown RBP11.51□□□□□ -0.57
SNIP1-204ENST00000638725 KLF6Q99612 283 aaPredicted RBP11.51□□□□□ -0.57
SNIP1-204ENST00000638725 SENP7Q9BQF6 1050 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 RAVER2Q9HCJ3 691 aaKnown RBP11.51□□□□□ -0.57
SNIP1-204ENST00000638725 SLC24A2Q9UI40 661 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 CLUHO75153 1309 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 NFASCO94856 1347 aa11.51□□□□□ -0.57
SNIP1-204ENST00000638725 TESPA1A2RU30 521 aaPredicted RBP11.5□□□□□ -0.57
SNIP1-204ENST00000638725 EME2A4GXA9 379 aaPredicted RBP11.5□□□□□ -0.57
SNIP1-204ENST00000638725 DPPA5A6NC42 116 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 GOLGA8RI6L899 631 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 SGK1O00141 431 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 TJP3O95049 919 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 C4BPAP04003 597 aaKnown RBP11.5□□□□□ -0.57
SNIP1-204ENST00000638725 GARTP22102 1010 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 ACOT2P49753 483 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 JAK3P52333 1124 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 NLRP11P59045 1033 aaKnown RBP11.5□□□□□ -0.57
SNIP1-204ENST00000638725 PLCB3Q01970 1234 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 CUL2Q13617 745 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 TFDP1Q14186 410 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 PGM5Q15124 567 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 OASLQ15646 514 aaKnown RBP11.5□□□□□ -0.57
SNIP1-204ENST00000638725 EFHC2Q5JST6 749 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 FYB2Q5VWT5 728 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 DRICH1Q6PGQ1 229 aaPredicted RBP11.5□□□□□ -0.57
SNIP1-204ENST00000638725 SPOCD1Q6ZMY3 1216 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.5□□□□□ -0.57
SNIP1-204ENST00000638725 TAB3Q8N5C8 712 aaPredicted RBP11.5□□□□□ -0.57
SNIP1-204ENST00000638725 TEX9Q8N6V9 391 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 RBBP8NLQ8NC74 664 aaPredicted RBP11.5□□□□□ -0.57
SNIP1-204ENST00000638725 ZNF483Q8TF39 744 aaPredicted RBP11.5□□□□□ -0.57
SNIP1-204ENST00000638725 NTPCRQ9BSD7 190 aaKnown RBP11.5□□□□□ -0.57
SNIP1-204ENST00000638725 C10orf88Q9H8K7 445 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 ALG13Q9NP73 1137 aaKnown RBP11.5□□□□□ -0.57
SNIP1-204ENST00000638725 IP6K2Q9UHH9 426 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 F8VP50 259 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 ZNF862O60290 1169 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 GLRA2P23416 452 aa11.5□□□□□ -0.57
SNIP1-204ENST00000638725 MARK3P27448 753 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms