RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-223	ENST00000637293	FAM169A	Q9Y6X4	670 aa		2.82	□□□□□ -1.96
GABRB3-223	ENST00000637293	SPAG9	O60271	1321 aa	Known RBP	2.82	□□□□□ -1.96
GABRB3-223	ENST00000637293	PIK3R4	Q99570	1358 aa		2.82	□□□□□ -1.96
GABRB3-223	ENST00000637293	EIF4G1	Q04637	1599 aa	Known RBP	2.82	□□□□□ -1.96
GABRB3-223	ENST00000637293		A0A0U1RQK1	487 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	RNF103-CHMP3	A0A140T963	221 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	CLRN2	A0PK11	232 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	PRSS38	A1L453	326 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	ZNF320	A2RRD8	509 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	TRIM43B	A6NCK2	446 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	AKR1B15	C9JRZ8	316 aa	Predicted RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293		H3BNC9	293 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293		H7BY64	318 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	RNF103	O00237	685 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	PGRMC2	O15173	223 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	SOCS5	O75159	536 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	LRIG2	O94898	1065 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	GGPS1	O95749	300 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	ANXA1	P04083	346 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	MME	P08473	750 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	BMP2	P12643	396 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	ALAS1	P13196	640 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	BMP1	P13497	986 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	JUP	P14923	745 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	GSPT1	P15170	499 aa	Known RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	NPR1	P16066	1061 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	FER	P16591	822 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	NPPB	P16860	134 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	CYP7A1	P22680	504 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	IL4R	P24394	825 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	CCNC	P24863	283 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	NFKBIA	P25963	317 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	MAPK4	P31152	587 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	HOXA11	P31270	313 aa	Predicted RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	RFC1	P35251	1148 aa	Predicted RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	MCAM	P43121	646 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	MATR3	P43243	847 aa	Known RBP eCLIP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	CAPZA2	P47755	286 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	IFNAR2	P48551	515 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	CARS	P49589	748 aa	Known RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	CCT4	P50991	539 aa	Known RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	GPC3	P51654	580 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	ARFIP2	P53365	341 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	SEC24C	P53992	1094 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	EMP3	P54852	163 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	MLLT6	P55198	1093 aa	Predicted RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	HDAC4	P56524	1084 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	SLC26A5	P58743	744 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	NLRP12	P59046	1061 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	RPS16	P62249	146 aa	Known RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	ARF5	P84085	180 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	HTD2	P86397	168 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	ZNF200	P98182	395 aa	Predicted RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	DMTN	Q08495	405 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	GALNT2	Q10471	571 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	SCAP	Q12770	1279 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	AIMP2	Q13155	320 aa	Known RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	CBX3	Q13185	183 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	RAB32	Q13637	225 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	IL10RA	Q13651	578 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	CAMK1	Q14012	370 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	CRYM	Q14894	314 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	RAB39A	Q14964	217 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	TBCE	Q15813	527 aa	Predicted RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	ADRM1	Q16186	407 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	AOC3	Q16853	763 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	CEP55	Q53EZ4	464 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	DCAF17	Q5H9S7	520 aa	Predicted RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	GARNL3	Q5VVW2	1013 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	GDF6	Q6KF10	455 aa	Predicted RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	MFSD5	Q6N075	450 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	SHQ1	Q6PI26	577 aa	Known RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	INO80C	Q6PI98	192 aa	Predicted RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	SLC22A25	Q6T423	547 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	ANGPTL8	Q6UXH0	198 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	IKBIP	Q70UQ0	350 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	RAB11FIP2	Q7L804	512 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	PIWIL3	Q7Z3Z3	882 aa	Known RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	ADGRA1	Q86SQ6	560 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	RAB11FIP4	Q86YS3	637 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	AGGF1	Q8N302	714 aa	eCLIP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	HDDC3	Q8N4P3	179 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	SH2D3C	Q8N5H7	860 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	KLHL23	Q8NBE8	558 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	GLIS1	Q8NBF1	620 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	ZBTB44	Q8NCP5	570 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	DNAJB8	Q8NHS0	232 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	NFKBID	Q8NI38	313 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	PSMA8	Q8TAA3	256 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	SPATA20	Q8TB22	786 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	SETD6	Q8TBK2	473 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	KIAA1524	Q8TCG1	905 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	NOC3L	Q8WTT2	800 aa	Known RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	TSPEAR	Q8WU66	669 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	FAM216A	Q8WUB2	273 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	PPP1R13L	Q8WUF5	828 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	SHC3	Q92529	594 aa		2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	ZNF75CP	Q92670	426 aa	Predicted RBP	2.81	□□□□□ -1.96
GABRB3-223	ENST00000637293	KRT35	Q92764	455 aa		2.81	□□□□□ -1.96

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